RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GPR132Q9UNW8 380 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 TP53TG1Q9Y2A0 90 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 HYDINQ4G0P3 5121 aa7.75□□□□□ -1.17
HMGXB3-205ENST00000514469 IGHV3-49A0A0A0MS15 119 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 KIR2DL5BA0A0G2JN68 375 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 KIR2DL5BA0A0G2JPC4 375 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 NOL3O60936 208 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 RPL5P46777 297 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 SPCS3P61009 180 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 Q6ZWC4 215 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 SELENOHQ8IZQ5 122 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 KIR2DL5AQ8N109 375 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 OR51S1Q8NGJ8 323 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 KIR2DL5BQ8NHK3 375 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 ST8SIA2Q92186 375 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 GALNT14Q96FL9 552 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 SOSTQ9BQB4 213 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 FNDC4Q9H6D8 234 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 ENY2Q9NPA8 101 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 MRPL36Q9P0J6 103 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 RSL24D1Q9UHA3 163 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 PUS1Q9Y606 427 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 TMEM56-RWDD3S4R434 201 aa7.74□□□□□ -1.17
HMGXB3-205ENST00000514469 IGHV3OR16-13A0A075B7E8 117 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 IGHV3-74A0A0B4J1X5 117 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 A0A1B0GU03 582 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 UBE2CO00762 179 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 CLN5O75503 358 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 TMEM50AO95807 157 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 CD5P06127 495 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 BMI1P35226 326 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 OPRK1P41145 380 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 DEFB135Q30KP9 77 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 TMEM268Q5VZI3 342 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 OR4X1Q8NH49 305 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 IL22RA2Q969J5 263 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 GPR146Q96CH1 333 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 CACNG5Q9UF02 275 aa7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-205ENST00000514469 TRAV2A0A0B4J234 112 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 SPRY2O43597 315 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 APOHP02749 345 aaPredicted RBP7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 TNFSF8P32971 234 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 HTR2BP41595 481 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 TFPI2P48307 235 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 TMEM187Q14656 261 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 C2orf83Q53S99 150 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 TCF24Q7RTU0 167 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 STPG3Q8N7X2 389 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 RNF183Q96D59 192 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 SCP2D1Q9UJQ7 156 aa7.72□□□□□ -1.17
HMGXB3-205ENST00000514469 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 A0A0J9YWU9 116 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 SCGB2A1O75556 95 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 JTBO76095 146 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 IGKV1-17P01599 117 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 CMC4P56277 68 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 ZNF124Q15973 351 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 MLANAQ16655 118 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 LYG2Q86SG7 212 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 LILRB2Q8N423 598 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 GBGT1Q8N5D6 347 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 SLC24A4Q8NFF2 622 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 MCFD2Q8NI22 146 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 TMEM170AQ8WVE7 144 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 TRIM63Q969Q1 353 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 HEYLQ9NQ87 328 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
HMGXB3-205ENST00000514469 TRAV30A0A087WSZ9 112 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 A0A0B4J2A0 478 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 RPS10-NUDT3A0A1W2PQS6 291 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 FABP12A6NFH5 140 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 CEBPZOSA8MTT3 80 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 DFFBO76075 338 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 SULT1A3P0DMM9 295 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 SULT1A4P0DMN0 295 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 SLC25A4P12235 298 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 ATF4P18848 351 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 CRYBB3P26998 211 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 PAFAH1B2P68402 229 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 EWSR1Q01844 656 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 KLF9Q13886 244 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 TIGITQ495A1 244 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 NMSQ5H8A3 153 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 PRSS54Q6PEW0 395 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 RNASEH2CQ8TDP1 164 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 SCGB3A2Q96PL1 93 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 TMEM231Q9H6L2 316 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 MCUBQ9NWR8 336 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 CACFD1Q9UGQ2 172 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms