RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 SNRNP200O75643 2136 aaKnown RBP10.93□□□□□ -0.66
TCOF1-213ENST00000514442 H3BVH4 76 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 TNFRSF14Q92956 283 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 IGHV3-35A0A0C4DH35 117 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 WIPF3A6NGB9 483 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 C17orf100A8MU93 164 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 LYNX1G3V0Z9 82 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 RBFOX2O43251 390 aaKnown RBP eCLIP10.93□□□□□ -0.66
TCOF1-213ENST00000514442 C8orf88P0DMB2 117 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 LYNX1P0DP58 116 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 OR4A5Q8NH83 315 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 COL6A6A6NMZ7 2263 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 A0A1W2PS18 150 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 OR2T8A6NH00 312 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 TMEM116Q8NCL8 245 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 CRIM1Q9NZV1 1036 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 CACNA1DQ01668 2161 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 CCL3L1P16619 93 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 IGKV1-12A0A0C4DH73 117 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 IGKV1D-12P01611 117 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 GTSF1LQ9H1H1 148 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 MRPL27Q9P0M9 148 aaKnown RBP10.92□□□□□ -0.66
TCOF1-213ENST00000514442 IGKV3D-15A0A087WSY6 115 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-213ENST00000514442 WDR82Q6UXN9 313 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 C19orf24Q9BVV8 132 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 CSTL1Q9H114 145 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 ROS1P08922 2347 aa10.92□□□□□ -0.66
TCOF1-213ENST00000514442 TMEM177Q53S58 311 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 OR4X2Q8NGF9 303 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 AP5S1Q9NUS5 200 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
TCOF1-213ENST00000514442 PLAURQ03405 335 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 S4R3C0 116 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 IGHV2-26A0A0B4J1V2 119 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 LY6G6EA0A0G2JKS1 128 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 RRHO14718 337 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 SNRNP40Q96DI7 357 aaKnown RBP10.91□□□□□ -0.66
TCOF1-213ENST00000514442 U3KQA8 63 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 TRAV24A0A0B4J272 114 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 KBTBD11-OT1A0A1B0GTJ5 212 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-213ENST00000514442 MOSP00540 346 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
TCOF1-213ENST00000514442 CGB1A6NKQ9 187 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 ZNF726P1Q15940 193 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 NPIPB3Q92617 1050 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 DOCK9Q9BZ29 2069 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 A0A1B0GWB2 263 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 C9JCJ5 164 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 K7EP13 123 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 FCGR2BP31994 310 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-213ENST00000514442 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
TCOF1-213ENST00000514442 SGK494Q96LW2 274 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 ESPL1Q14674 2120 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 IGHV2-70DA0A0C4DH43 119 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 TTC32Q5I0X7 151 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 FER1L6-AS1Q8NA97 138 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 MDS2Q8NDY4 140 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-213ENST00000514442 IGKV1-27A0A075B6S5 117 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 WISP1O95388 367 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 PCSK4Q6UW60 755 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 FBXL15Q9H469 300 aa10.9□□□□□ -0.66
TCOF1-213ENST00000514442 KIR2DL2P43627 348 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 B3GALT5-AS1P59052 145 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 HSD52Q0P140 79 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 MRPL20Q9BYC9 149 aaKnown RBP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 A0A087X0K7 114 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 PGPA6NDG6 321 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 IL18BPO95998 194 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 SCGB1D4Q6XE38 83 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 OR1N2Q8NGR9 330 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 ZNF146Q15072 292 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 MRPL32Q9BYC8 188 aaKnown RBP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 PNRC2Q9NPJ4 139 aaKnown RBP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 TMEM238LA0A1B0GVL6 79 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 A6NJY4 79 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
TCOF1-213ENST00000514442 SRSF9Q13242 221 aaKnown RBP eCLIP10.89□□□□□ -0.67
TCOF1-213ENST00000514442 RPL15P61313 204 aaKnown RBP10.88□□□□□ -0.67
TCOF1-213ENST00000514442 PSG9Q00887 426 aa10.88□□□□□ -0.67
TCOF1-213ENST00000514442 RNASE6Q93091 150 aaKnown RBP10.88□□□□□ -0.67
TCOF1-213ENST00000514442 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
TCOF1-213ENST00000514442 APOHP02749 345 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-213ENST00000514442 RPL30P62888 115 aaKnown RBP10.88□□□□□ -0.67
TCOF1-213ENST00000514442 CX3CL1P78423 397 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms