RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 OR13C8Q8NGS7 320 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 OR52E5Q8NH55 327 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 RAB2BQ8WUD1 216 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 DIRAS2Q96HU8 199 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 NARS2Q96I59 477 aaKnown RBP5.43□□□□□ -1.54
HTT-212ENST00000513639 TP53RKQ96S44 253 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 RNF2Q99496 336 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 PRRT1Q99946 306 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 NAA50Q9GZZ1 169 aaKnown RBP5.43□□□□□ -1.54
HTT-212ENST00000513639 TMEM222Q9H0R3 208 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 TMEM231Q9H6L2 316 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 RETNQ9HD89 108 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 RSL24D1Q9UHA3 163 aaKnown RBP5.43□□□□□ -1.54
HTT-212ENST00000513639 STARD9Q9P2P6 4700 aa5.43□□□□□ -1.54
HTT-212ENST00000513639 IGHV3OR16-8A0A075B7F1 116 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 RPS10-NUDT3A0A1W2PQS6 291 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 MPTX1A8MV57 137 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 CTDSP2O14595 271 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 ST8SIA3O43173 380 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 DFFBO76075 338 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 P0C879 139 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 AKAIN1P0CW23 69 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 ALDH3B2P48448 385 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 HOXA1P49639 335 aaPredicted RBP5.42□□□□□ -1.54
HTT-212ENST00000513639 RPL11P62913 178 aaKnown RBP5.42□□□□□ -1.54
HTT-212ENST00000513639 TNFRSF9Q07011 255 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 SP6Q3SY56 376 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 RNASE12Q5GAN4 147 aaKnown RBP5.42□□□□□ -1.54
HTT-212ENST00000513639 PVRIGQ6DKI7 326 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 TOMM20LQ6UXN7 152 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 CLVS1Q8IUQ0 354 aaPredicted RBP5.42□□□□□ -1.54
HTT-212ENST00000513639 OR4D10Q8NGI6 311 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 OR4X1Q8NH49 305 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 MARCH1Q8TCQ1 289 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 SMIM4Q8WVI0 70 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 TMEM230Q96A57 120 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 RNF183Q96D59 192 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 CSTL1Q9H114 145 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 HEYLQ9NQ87 328 aaPredicted RBP5.42□□□□□ -1.54
HTT-212ENST00000513639 UBQLN2Q9UHD9 624 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 SCP2D1Q9UJQ7 156 aa5.42□□□□□ -1.54
HTT-212ENST00000513639 PLECQ15149 4684 aaKnown RBP5.42□□□□□ -1.54
HTT-212ENST00000513639 TRAV2A0A0B4J234 112 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 FABP12A6NFH5 140 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 GSTZ1O43708 216 aaPredicted RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 NOL3O60936 208 aaKnown RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 CLN5O75503 358 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 SMIM18P0DKX4 95 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 OPRK1P41145 380 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 EIF2B2P49770 351 aaKnown RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 PPP5CP53041 499 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 AP2S1P53680 142 aaPredicted RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 ATP5IP56385 69 aaPredicted RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 IL18Q14116 193 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 IZUMO4Q1ZYL8 232 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 ODF3L2Q3SX64 289 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 AARDQ4LEZ3 155 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 FAM90A2PQ658T7 463 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 ETFRF1Q6IPR1 90 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 TCF24Q7RTU0 167 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 SELENOHQ8IZQ5 122 aaKnown RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 RNASEH2CQ8TDP1 164 aaKnown RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 Q8WTZ3 238 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 GLYATL2Q8WU03 294 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 GATAD1Q8WUU5 269 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 RBPMSQ93062 196 aaKnown RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 GRAMD2BQ96HH9 432 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 METTL26Q96S19 204 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 RTBDNQ9BSG5 229 aaPredicted RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 MIXL1Q9H2W2 232 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 NAA60Q9H7X0 242 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 MAP6D1Q9H9H5 199 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 CCDC59Q9P031 241 aaKnown RBP5.41□□□□□ -1.54
HTT-212ENST00000513639 GPR132Q9UNW8 380 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 PUS1Q9Y606 427 aaKnown RBP eCLIP5.41□□□□□ -1.54
HTT-212ENST00000513639 TMEM56-RWDD3S4R434 201 aa5.41□□□□□ -1.54
HTT-212ENST00000513639 IGHV3-49A0A0A0MS15 119 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 CXorf65A6NEN9 183 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 OR5AC1P0C628 307 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 RNASE2P10153 161 aaKnown RBP5.4□□□□□ -1.54
HTT-212ENST00000513639 SLC25A4P12235 298 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 ANXA3P12429 323 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 RPL35AP18077 110 aaKnown RBP5.4□□□□□ -1.54
HTT-212ENST00000513639 TFPI2P48307 235 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 SPCS2Q15005 226 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 DEFB135Q30KP9 77 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 BSXQ3C1V8 233 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 C2orf83Q53S99 150 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 SPINK9Q5DT21 86 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 Q6ZRM9 215 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 LYG2Q86SG7 212 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 APRG1Q8IVJ8 170 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 GBGT1Q8N5D6 347 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 OR51S1Q8NGJ8 323 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 DYNC2LI1Q8TCX1 351 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 IL22RA2Q969J5 263 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 MS4A6AQ9H2W1 248 aa5.4□□□□□ -1.54
HTT-212ENST00000513639 PFDN2Q9UHV9 154 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms