RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 C1orf147Q96MC9 270 aaPredicted RBP9.4□□□□□ -0.91
TCOF1-211ENST00000513346 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 NLRC5Q86WI3 1866 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 IGKV1-27A0A075B6S5 117 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 GP6Q9HCN6 339 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 C9orf172C9J069 976 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 ESDP10768 282 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 TMEM186Q96B77 213 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 IGHV3-21A0A0B4J1V1 117 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 RAMP3O60896 148 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 CDKN1BP46527 198 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 ZFP36L1Q07352 338 aaKnown RBP9.39□□□□□ -0.91
TCOF1-211ENST00000513346 HSD52Q0P140 79 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 CALYQ9NYX4 217 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 A0A1W2PS18 150 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 WIPF3A6NGB9 483 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-211ENST00000513346 RASL11AQ6T310 242 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 TMEM144Q7Z5S9 345 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 GPR82Q96P67 336 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 LINC00470Q9BZP3 86 aa9.39□□□□□ -0.91
TCOF1-211ENST00000513346 DOCK11Q5JSL3 2073 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 TMEM50AO95807 157 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 CD40P25942 277 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 DLX1P56177 255 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 STPG4Q8N801 248 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 IFI27L2Q9H2X8 130 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 PNRC2Q9NPJ4 139 aaKnown RBP9.38□□□□□ -0.91
TCOF1-211ENST00000513346 MUC21A0A0G2JKD1 596 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 MUC21A0A140T8X8 626 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 MMP23AO75900 390 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 PAX2Q02962 417 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 MUC21Q5SSG8 566 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 SPACA3Q8IXA5 215 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF502Q8TBZ5 544 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 PRELID3AQ96N28 172 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 CLEC7AQ9BXN2 247 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 TRAV24A0A0B4J272 114 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 A0A0G2JMM0 328 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 A0A1W2PPB8 328 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 C5orf63A6NC05 138 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 KIR3DP1A8MWS1 328 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 NTN3O00634 580 aaPredicted RBP9.38□□□□□ -0.91
TCOF1-211ENST00000513346 APELAP0DMC3 54 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 GOLT1AQ6ZVE7 132 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 A0A0G2JLM5 398 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 A0A0G2JRQ6 117 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 CRYGSP22914 178 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
TCOF1-211ENST00000513346 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 GGTLC1Q9BX51 225 aa9.38□□□□□ -0.91
TCOF1-211ENST00000513346 LOC102723996A0A087X1L8 192 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 hDV102S1A0JD36 115 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 H3BTX0 84 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 MSRB2Q9Y3D2 182 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 DOCK7Q96N67 2140 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 A0A087X0K7 114 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 A0A1B0GW15 77 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 RPL27AP46776 148 aaKnown RBP9.37□□□□□ -0.91
TCOF1-211ENST00000513346 RPL39P5Q59GN2 51 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-211ENST00000513346 NBL1P41271 181 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF726P1Q15940 193 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 Q6ZRM9 215 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 Q6ZS49 121 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-211ENST00000513346 OR9G4Q8NGQ1 327 aa9.37□□□□□ -0.91
TCOF1-211ENST00000513346 IFNL4K9M1U5 179 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 GFRA1P56159 465 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 FAM27E3Q08E93 113 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 NRN1LQ496H8 165 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF788Q6ZQV5 615 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF581Q9P0T4 197 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 PIEZO2Q9H5I5 2752 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.919e-7■■■■□ 22.6
TCOF1-211ENST00000513346 J3QW42 95 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 PAX9P55771 341 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 HCP5Q6MZN7 132 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 FADS6Q8N9I5 356 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 C18orf15Q96N68 181 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 PYGO2Q9BRQ0 406 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 VCX2Q9H322 139 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
TCOF1-211ENST00000513346 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 F5H697 171 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF497Q6ZNH5 498 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 OR11H1Q8NG94 326 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 OR11H2Q8NH07 326 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 FMC1Q96HJ9 113 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 669.1 ms