RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 MT-CO2P00403 227 aa19.22■□□□□ 0.67
SPOCK3-221ENST00000512648 CYB5R2Q6BCY4 276 aa19.22■□□□□ 0.67
SPOCK3-221ENST00000512648 HIST2H2BCQ6DN03 193 aa19.22■□□□□ 0.67
SPOCK3-221ENST00000512648 C9orf139Q6ZV77 190 aa19.22■□□□□ 0.67
SPOCK3-221ENST00000512648 TMEM231Q9H6L2 316 aa19.22■□□□□ 0.67
SPOCK3-221ENST00000512648 A6NDX4 124 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 APELAP0DMC3 54 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 DEFA4P12838 97 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 RND2P52198 227 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 RHOBP62745 196 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 RBMS3Q6XE24 437 aaKnown RBP19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 C16orf82Q7Z2V1 217 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 OR4X1Q8NH49 305 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 SLC25A22Q9H936 323 aa19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 MRPL36Q9P0J6 103 aaKnown RBP19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 UTP20O75691 2785 aaKnown RBP19.21■□□□□ 0.67
SPOCK3-221ENST00000512648 IFNA1P01562 189 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 HSPB1P04792 205 aaKnown RBP19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 PPT1P50897 306 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 GCSAMLQ5JQS6 135 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 CCDC28AQ8IWP9 274 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 FOXC2Q99958 501 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 FAM103A1Q9BTL3 118 aaKnown RBP19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 SLC35B3Q9H1N7 401 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 PITPNC1Q9UKF7 332 aa19.2■□□□□ 0.66
SPOCK3-221ENST00000512648 IGLV11-55A0A075B6I3 123 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 LOC102723971A0A1B0GUV8 181 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 A0A1B0GV50 99 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 M0QZK8 103 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 STAG3L2P0CL84 134 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 STAG3L3P0CL85 134 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 PSMB3P49720 205 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 CRIP2P52943 208 aaPredicted RBP19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 MAPK1IP1LQ8NDC0 245 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 FANCD2OSQ96PS1 177 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 RNF2Q99496 336 aa19.19■□□□□ 0.66
SPOCK3-221ENST00000512648 K7EIM0 57 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 SFTA3P0C7M3 94 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 HIST1H1BP16401 226 aaKnown RBP19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 ICAM4Q14773 271 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 AKIRIN2Q53H80 203 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 C19orf35Q6ZS72 473 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 SLC35E3Q7Z769 313 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 NANPQ8TBE9 248 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 GATAD1Q8WUU5 269 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 ZNF48Q96MX3 618 aaPredicted RBP19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 RARRES2Q99969 163 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 HSPB9Q9BQS6 159 aa19.18■□□□□ 0.66
SPOCK3-221ENST00000512648 F8W036 122 aa19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 BCL2P10415 239 aa19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 ADCYAP1P18509 176 aa19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 FGF8P55075 233 aaPredicted RBP19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 FAM110DQ8TAY7 271 aaPredicted RBP19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 TNFRSF19Q9NS68 423 aa19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 THYN1Q9P016 225 aa19.17■□□□□ 0.66
SPOCK3-221ENST00000512648 PSMB11A5LHX3 300 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 ZFP92A6NM28 416 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 AMY1AP04745 511 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 OR5G3P0C626 314 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 MANBALQ9NQG1 85 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 GNG13Q9P2W3 67 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 VAX2Q9UIW0 290 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 PLXNB1O43157 2135 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 CXorf1O96002 111 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 APOC3P02656 99 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 PLP1P60201 277 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 HAGHQ16775 308 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 OR1L4Q8NGR5 311 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 MRPL32Q9BYC8 188 aaKnown RBP19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 DNAJC4Q9NNZ3 241 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 FUT9Q9Y231 359 aa19.16■□□□□ 0.66
SPOCK3-221ENST00000512648 H3BUX3 64 aa19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 CLN5O75503 358 aa19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 SRP19P09132 144 aaKnown RBP19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 SVBPQ8N300 66 aa19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 TEX29Q8N6K0 151 aa19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 PFDN5Q99471 154 aa19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 SEPSECSQ9HD40 501 aaKnown RBP19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 SOX21Q9Y651 276 aaPredicted RBP19.15■□□□□ 0.66
SPOCK3-221ENST00000512648 IGLC1P0CG04 106 aa19.14■□□□□ 0.65
SPOCK3-221ENST00000512648 PRDM13Q9H4Q3 707 aa19.14■□□□□ 0.65
SPOCK3-221ENST00000512648 ANKRD17O75179 2603 aaKnown RBP19.14■□□□□ 0.65
SPOCK3-221ENST00000512648 DOPEY2Q9Y3R5 2298 aa19.14■□□□□ 0.65
SPOCK3-221ENST00000512648 NAV2Q8IVL1 2488 aa19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 TRAV30A0A087WSZ9 112 aa19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 ELOA3CA0A087WX78 387 aaPredicted RBP19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 ATP6V0E1O15342 81 aa19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 IGHV3-48P01763 117 aa19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 FCGR2BP31994 310 aaPredicted RBP19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 TACC2O95359 2948 aa19.13■□□□□ 0.65
SPOCK3-221ENST00000512648 FABP1P07148 127 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 GATA2P23769 480 aaPredicted RBP19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 NPBWR1P48145 328 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 ZNF90Q03938 601 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 C19orf54Q5BKX5 351 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 FAM78BQ5VT40 261 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 UNQ5815/PRO19632Q6UWF5 114 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 TMEM219Q86XT9 240 aa19.12■□□□□ 0.65
SPOCK3-221ENST00000512648 WFDC11Q8NEX6 87 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms