RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 DUX4L9Q6RFH8 374 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF66Q6ZN08 573 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GDF7Q7Z4P5 450 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NAXDQ8IW45 347 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MMD2Q8IY49 270 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 Q8N1Y9 231 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 POC1AQ8NBT0 407 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NFAM1Q8NET5 270 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR1B1Q8NGR6 318 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SMIM4Q8WVI0 70 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CACNG8Q8WXS5 425 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR5P3Q8WZ94 311 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 AQP3Q92482 292 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C14orf144Q96I85 54 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 VSTM2LQ96N03 204 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SCGB3A1Q96QR1 104 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GGTLC1Q9BX51 225 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SNHG12Q9BXW3 62 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 WWTR1Q9GZV5 400 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 AUNIPQ9H7T9 357 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SRD5A3Q9H8P0 318 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MBNL1Q9NR56 388 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CBLN4Q9NTU7 201 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NECAP2Q9NVZ3 263 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CISD1Q9NZ45 108 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 LAMTOR3Q9UHA4 124 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 LOXL2Q9Y4K0 774 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGLV3-32A0A0A0MS00 114 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRGV5A0A0B4J1U4 118 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV3OR2-268A0A0C4DH90 116 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1W2PPQ1 181 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NPIPB4C9JG80 1138 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 LEFTY2O00292 366 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SMAD9O15198 467 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 LEFTY1O75610 366 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 AKR7A3O95154 331 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 P01737 135 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MBPP02686 304 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PMP2P02689 132 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ISG15P05161 165 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MGPP08493 103 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 WT1P19544 449 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ALOX5APP20292 161 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GATA2P23769 480 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD27P26842 260 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PTGER1P34995 402 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR1E2P47887 323 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RPL15P61313 204 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRA2BP62995 288 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MEF2BQ02080 365 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FOXF2Q12947 444 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MADCAM1Q13477 382 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NNATQ16517 81 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 VWC2Q2TAL6 325 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR2D3Q8NGH3 330 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR52N4Q8NGI2 321 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PPP1R1CQ8WVI7 109 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PP6455Q8WZ26 134 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM19Q96HH6 336 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 KCNS1Q96KK3 526 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C4orf45Q96LM5 186 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 HDHD3Q9BSH5 251 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CHCHD5Q9BSY4 110 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CHST5Q9GZS9 411 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC35B3Q9H1N7 401 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC25A22Q9H936 323 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 BEX1Q9HBH7 125 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ONECUT1Q9UBC0 465 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRNDQ9UKY0 176 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 INSL5Q9Y5Q6 135 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DMRT1Q9Y5R6 373 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRGV4A0A0C4DH28 118 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRSS29PA6NIE9 313 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM212A6NML5 194 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CTAG2O75638 210 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MMP23AO75900 390 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZFPL1O95159 310 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TOMM40O96008 361 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 HMGN2P05204 90 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 HIST1H1DP16402 221 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 COX7A1P24310 79 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TIA1P31483 386 aaKnown RBP eCLIP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MP68P56378 58 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD81P60033 236 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RPS27AP62979 156 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 UBA52P62987 128 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RUNX1Q01196 453 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM30BQ3MIR4 351 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 KRTCAP3Q53RY4 240 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C9orf135Q5VTT2 229 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TBC1D26Q86UD7 250 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF761Q86XN6 746 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 LYG1Q8N1E2 194 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 AQP11Q8NBQ7 271 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR51F2Q8NH61 342 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RAB40CQ96S21 281 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DSCR8Q96T75 97 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms