RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CTSDP07339 412 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 PIPP12273 146 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 PTGDSP41222 190 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 PPICP45877 212 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF85Q03923 595 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR2T2Q6IF00 324 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 Q6ZS92 163 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 Q6ZVQ6 151 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF550Q7Z398 422 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM183AQ8IXX5 376 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 TOMM5Q8N4H5 51 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 GVQW1Q8N7I0 195 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MAL2Q969L2 176 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 PLEKHB2Q96CS7 222 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 CARD19Q96LW7 228 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MCHR1Q99705 422 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 GABARAPL3Q9BY60 117 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 DEFB127Q9H1M4 99 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 JPT2Q9H910 190 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 CA10Q9NS85 328 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MED31Q9Y3C7 131 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 SPTAN1Q13813 2472 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM235A6NFC5 223 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 GGT3PA6NGU5 568 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ATP5G1P05496 136 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ATP6V0CP27449 155 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 AQP1P29972 269 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MTPNP58546 118 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 HBG1P69891 147 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 HBG2P69892 147 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 POU3F1Q03052 451 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF791Q3KP31 576 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 IGFL3Q6UXB1 125 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 APOOLQ6UXV4 268 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MARCH3Q86UD3 253 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF695Q8IW36 515 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 C10orf111Q8N326 155 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF441Q8N8Z8 693 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR8B12Q8NGG6 310 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR4C3Q8NH37 302 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 NEIL3Q8TAT5 605 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 SLAMF6Q96DU3 332 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 C9orf85Q96MD7 179 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF471Q9BX82 626 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 KCNIP2Q9NS61 270 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 RNF7Q9UBF6 113 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MCTS1Q9ULC4 181 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 LSM2Q9Y333 95 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 YTHDF2Q9Y5A9 579 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 CHCHD2Q9Y6H1 151 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 SETXQ7Z333 2677 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 FLNBO75369 2602 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 MED12Q93074 2177 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 TRAV26-2A0A0B4J265 109 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 A0A0U1RQV1 116 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 A0A1B0GV50 99 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 A0A1B0GWB2 263 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 NAP1L6A6NFF2 107 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 H0YIZ8 118 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 H3BP45 60 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 J3QT63 122 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 CD14P08571 375 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 CFPP27918 469 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 PSG9Q00887 426 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 PIK3CD-AS1Q5SR53 167 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF324BQ6AW86 544 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR5AP2Q8NGF4 316 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR2T27Q8NH04 317 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 DERL3Q96Q80 235 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 PARP11Q9NR21 331 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 VAX2Q9UIW0 290 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 TACC2O95359 2948 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 NINQ8N4C6 2090 aa4.03□□□□□ -1.76
TRAPPC11-208ENST00000511955 C15orf62A8K5M9 175 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 HMGN4O00479 90 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 NXPH3O95157 252 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 SCTP09683 121 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 IGLC6P0CF74 106 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 CD226Q15762 336 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF506Q5JVG8 444 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 MSRB3Q8IXL7 192 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 CIARTQ8N365 385 aaPredicted RBP4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 ANKRD29Q8N6D5 301 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR52P1PQ8NH57 321 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF519Q8TB69 540 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 ADAT3Q96EY9 351 aaPredicted RBP4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 TTTY12Q9BZ98 90 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 CHST6Q9GZX3 395 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 Q9HAA7 133 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 TVP23BQ9NYZ1 205 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 CYSLTR1Q9Y271 337 aa4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 KLF13Q9Y2Y9 288 aaPredicted RBP4.03□□□□□ -1.77
TRAPPC11-208ENST00000511955 EML6Q6ZMW3 1958 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 CPAMD8Q8IZJ3 1885 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 C5orf63A6NC05 138 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM212A6NML5 194 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms