RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PDLIM3Q53GG5 364 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 SPINK9Q5DT21 86 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 NMSQ5H8A3 153 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 GGNBP1Q5YKI7 109 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 C11orf87Q6NUJ2 197 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 CLEC19AQ6UXS0 136 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 ZNF546Q86UE3 836 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 LRTM2Q8N967 370 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 INO80EQ8NBZ0 244 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 ZNF114Q8NC26 417 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 OR9G4Q8NGQ1 327 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 MISP3Q96FF7 219 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 CCDC140Q96MF4 163 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 OR4C12Q96R67 309 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 GSKIPQ9P0R6 139 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 MBD2Q9UBB5 411 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 TMED3Q9Y3Q3 217 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 S4R3C0 116 aa5.48□□□□□ -1.53
PDLIM5-215ENST00000511586 CMYA5Q8N3K9 4069 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 TRAV14DV4A0A0A6YYC5 116 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 KANTRA0A1W2PQU2 76 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 K7EIM0 57 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 CORTO00230 105 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 OR2C1O95371 312 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 MPC2O95563 127 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 SLC25A4P12235 298 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 SLC25A6P12236 298 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 CXCL2P19875 107 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 S100A11P31949 105 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 GPR183P32249 361 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 HTR2BP41595 481 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 AP2S1P53680 142 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 IFITM2Q01629 132 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 ZNF345Q14585 488 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 LGALSLQ3ZCW2 172 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 FAM106AQ4KMX7 169 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 TMUB2Q71RG4 321 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 GPHB5Q86YW7 130 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 ZNF502Q8TBZ5 544 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 SCARB1Q8WTV0 552 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 OR10C1Q96KK4 312 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 ATP6V0BQ99437 205 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 MFFQ9GZY8 342 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 ARL6Q9H0F7 186 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 HIPK2Q9H2X6 1198 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 HEYLQ9NQ87 328 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 ZC4H2Q9NQZ6 224 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 AURKAIP1Q9NWT8 199 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 GAR1Q9NY12 217 aaKnown RBP5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 C21orf62Q9NYP8 219 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 PEMTQ9UBM1 199 aa5.47□□□□□ -1.53
PDLIM5-215ENST00000511586 IGHV3-21A0A0B4J1V1 117 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 A0A0D9SG52 128 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 OR2T8A6NH00 312 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 CEBPZOSA8MTT3 80 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 MPTX1A8MV57 137 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 I3L2K1 104 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 LGALS9O00182 355 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 NXPH3O95157 252 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 MT-CO2P00403 227 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 IFNA7P01567 189 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 RLN2P04090 185 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 RNASE2P10153 161 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 MFAP4P55083 255 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 TNFRSF9Q07011 255 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 OR2F1Q13607 317 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 OPCMLQ14982 345 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 Q56UQ5 140 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 PVRIGQ6DKI7 326 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 PRSS54Q6PEW0 395 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 SPSB3Q6PJ21 355 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 IL34Q6ZMJ4 242 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 ZNF767PQ75MW2 155 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 OR1S1Q8NH92 325 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 PINX1Q96BK5 328 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 BSCL2Q96G97 398 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 TXN2Q99757 166 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 SIGLEC8Q9NYZ4 499 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 HSPB7Q9UBY9 170 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 TNFSF18Q9UNG2 199 aa5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 LSM5Q9Y4Y9 91 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-215ENST00000511586 WI2-2373I1.2A0A1W2PRP0 233 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 ZNF320A2RRD8 509 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 FAM90A26D6RGX4 464 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 NUPL2O15504 423 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 TGOLN2O43493 480 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 BCL2L11O43521 198 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 PITX3O75364 302 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 MED6O75586 246 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 CSN3P07498 182 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 FCGR2BP31994 310 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 NPBWR1P48145 328 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 RAB32Q13637 225 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 NDUFA5Q16718 116 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 BSXQ3C1V8 233 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 C2orf83Q53S99 150 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 ACOT7LQ6ZUV0 252 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 KCNRGQ8N5I3 272 aa5.45□□□□□ -1.54
PDLIM5-215ENST00000511586 UBAC2Q8NBM4 344 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms