RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 OCC1Q8TAD7 63 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 PERPQ96FX8 193 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 HINT2Q9BX68 163 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 TECRQ9NZ01 308 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 IL36BQ9NZH7 164 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 KAAG1Q9UBP8 84 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 PTPN13Q12923 2485 aa12.97□□□□□ -0.33
SQSTM1-213ENST00000510187 CELSR2Q9HCU4 2923 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 TEX50A0A1B0GTY4 177 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 NDUFB3O43676 98 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 MMP23AO75900 390 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 NDUFB7P17568 137 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 DDTP30046 118 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 TAS2R45P59539 299 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 TMEM155Q4W5P6 130 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 LRRC10Q5BKY1 277 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 PQLC2Q6ZP29 291 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 GBGT1Q8N5D6 347 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 CTSZQ9UBR2 303 aa12.96□□□□□ -0.33
SQSTM1-213ENST00000510187 TACC2O95359 2948 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 PGPEP1LA6NFU8 196 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 OR5G3P0C626 314 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 SAA1P0DJI8 122 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 REC114Q7Z4M0 266 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 C8orf31Q8N9H6 132 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 OR4A5Q8NH83 315 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 CACNG8Q8WXS5 425 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 NOL4LQ96MY1 436 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 NABP2Q9BQ15 211 aa12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 AURKAIP1Q9NWT8 199 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-213ENST00000510187 CENPEQ02224 2701 aa12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 IGKV1-16P04430 117 aa12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 RNASE2P10153 161 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 GPX4P36969 197 aaPredicted RBP12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 MIR17HGQ75NE6 70 aa12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 EAF1Q96JC9 268 aaPredicted RBP12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 RNF2Q99496 336 aa12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 MRPL32Q9BYC8 188 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-213ENST00000510187 FOXH1O75593 365 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 FCN3O75636 299 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 OR10J4P0C629 311 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 MYOD1P15172 320 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 SELENOTP62341 195 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 CD69Q07108 199 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 OR5AN1Q8NGI8 311 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
SQSTM1-213ENST00000510187 NBPF19A0A087WUL8 3843 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 A0A1W2PN81 502 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 H0YJW9 148 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 K7EN84 100 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 OR8B3Q8NGG8 313 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 ZNF596Q8TC21 504 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 FAM168AQ92567 244 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 C14orf144Q96I85 54 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 ZNF714Q96N38 554 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 OR8B2Q96RD0 313 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 MRPL20Q9BYC9 149 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 NDUFA4L2Q9NRX3 87 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 TRBV9A0A0B4J1U6 114 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 USF1P22415 310 aaPredicted RBP12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 OR10J1P30954 320 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 ZNF90Q03938 601 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 PSG5Q15238 335 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 VSTM2AQ8TAG5 236 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 H1FXQ92522 213 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 HARBI1Q96MB7 349 aa12.93□□□□□ -0.34
SQSTM1-213ENST00000510187 CSMD2Q7Z408 3487 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 A0A087X0M5 115 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 A0A1B0GX30 115 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 A0A1W2PRE2 83 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 RPL8P62917 257 aaKnown RBP12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 ERHP84090 104 aaKnown RBP12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 RPL19P84098 196 aaKnown RBP12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 IQCJQ1A5X6 159 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 PDPNQ86YL7 162 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 MRPL41Q8IXM3 137 aaKnown RBP12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 TMEM167AQ8TBQ9 72 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 PIMREGQ9BSJ6 248 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 COMMD5Q9GZQ3 224 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 ABCA12Q86UK0 2595 aa12.92□□□□□ -0.34
SQSTM1-213ENST00000510187 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 NDUFS8O00217 210 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 ACTL6BO94805 426 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 GNG4P50150 75 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 LGALS4P56470 323 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 RPEL1Q2QD12 228 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 C10orf105Q8TEF2 133 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 BEX4Q9NWD9 120 aaPredicted RBP12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 C8orf88P0DMB2 117 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 ADMP35318 185 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 HLA-DRB5Q30154 266 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 COX19Q49B96 90 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 CENPWQ5EE01 88 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms