RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
SMAD5-205ENST00000509297 TMEM229BQ8NBD8 167 aa11.27□□□□□ -0.61
SMAD5-205ENST00000509297 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
SMAD5-205ENST00000509297 C11orf45Q8TAV5 145 aa11.27□□□□□ -0.61
SMAD5-205ENST00000509297 RRNAD1Q96FB5 475 aaKnown RBP11.27□□□□□ -0.61
SMAD5-205ENST00000509297 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.61
SMAD5-205ENST00000509297 COPZ2Q9P299 210 aa11.27□□□□□ -0.61
SMAD5-205ENST00000509297 VPS13DQ5THJ4 4388 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 FAM25AB3EWG3 89 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 FAM25CB3EWG5 89 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 FAM25GB3EWG6 89 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 GABARAPO95166 117 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 ZNF182P17025 639 aaPredicted RBP11.26□□□□□ -0.61
SMAD5-205ENST00000509297 CRYBB3P26998 211 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 ETV6P41212 452 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 DEFB131AP59861 70 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 SSBP1Q04837 148 aaKnown RBP11.26□□□□□ -0.61
SMAD5-205ENST00000509297 CTF1Q16619 201 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 OR52E5Q8NH55 327 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 METTL26Q96S19 204 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 ABHD1Q96SE0 405 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 FNDC4Q9H6D8 234 aaPredicted RBP11.26□□□□□ -0.61
SMAD5-205ENST00000509297 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
SMAD5-205ENST00000509297 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 CDS2O95674 445 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 IFNA4P05014 189 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 HOXA1P49639 335 aaPredicted RBP11.25□□□□□ -0.61
SMAD5-205ENST00000509297 TAS2R19P59542 299 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 NANOS2P60321 138 aaKnown RBP11.25□□□□□ -0.61
SMAD5-205ENST00000509297 SPCS3P61009 180 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
SMAD5-205ENST00000509297 RBMS2Q15434 407 aaKnown RBP11.25□□□□□ -0.61
SMAD5-205ENST00000509297 OR13C8Q8NGS7 320 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 TMEM222Q9H0R3 208 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 HRH4Q9H3N8 390 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 MRPL36Q9P0J6 103 aaKnown RBP11.25□□□□□ -0.61
SMAD5-205ENST00000509297 EXTL2Q9UBQ6 330 aa11.25□□□□□ -0.61
SMAD5-205ENST00000509297 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 K7EQG2 157 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 IGKV1-17P01599 117 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 OPRK1P41145 380 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 HTR2BP41595 481 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 PPP5CP53041 499 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 MRPS10P82664 201 aaKnown RBP11.24□□□□□ -0.61
SMAD5-205ENST00000509297 SP6Q3SY56 376 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 LEMD1Q68G75 181 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
SMAD5-205ENST00000509297 TRPT1Q86TN4 253 aaKnown RBP11.24□□□□□ -0.61
SMAD5-205ENST00000509297 STHQ8IWL8 128 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
SMAD5-205ENST00000509297 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
SMAD5-205ENST00000509297 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.24□□□□□ -0.61
SMAD5-205ENST00000509297 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 RPS10-NUDT3A0A1W2PQS6 291 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 GABARAPH6UMI1 98 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 RAB3DO95716 219 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
SMAD5-205ENST00000509297 SPP1P10451 314 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 P2RY1P47900 373 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 MEF2DQ14814 521 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
SMAD5-205ENST00000509297 RNASE12Q5GAN4 147 aaKnown RBP11.23□□□□□ -0.61
SMAD5-205ENST00000509297 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 Q6ZRM9 215 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 Q8NAQ8 132 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 NARS2Q96I59 477 aaKnown RBP11.23□□□□□ -0.61
SMAD5-205ENST00000509297 CACFD1Q9UGQ2 172 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 RABAC1Q9UI14 185 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 U3KQE9 123 aa11.23□□□□□ -0.61
SMAD5-205ENST00000509297 HECTD4Q9Y4D8 3996 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 SLC25A4P12235 298 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
SMAD5-205ENST00000509297 MLANAQ16655 118 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 SCGB2B2Q4G0G5 96 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
SMAD5-205ENST00000509297 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
SMAD5-205ENST00000509297 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 GLYATL2Q8WU03 294 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 RBPMSQ93062 196 aaKnown RBP11.22□□□□□ -0.61
SMAD5-205ENST00000509297 TMEM230Q96A57 120 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 NAA50Q9GZZ1 169 aaKnown RBP11.22□□□□□ -0.61
SMAD5-205ENST00000509297 FBXL17Q9UF56 701 aa11.22□□□□□ -0.61
SMAD5-205ENST00000509297 TEX13DA0A0J9YY54 714 aaPredicted RBP11.21□□□□□ -0.61
SMAD5-205ENST00000509297 HELTA6NFD8 242 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 ZNF705EA8MWA4 302 aaPredicted RBP11.21□□□□□ -0.61
SMAD5-205ENST00000509297 C11orf94C9JXX5 98 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 IGLC1P0CG04 106 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 MIFP14174 115 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.61
SMAD5-205ENST00000509297 YPEL3P61236 119 aaPredicted RBP11.21□□□□□ -0.61
SMAD5-205ENST00000509297 DHODHQ02127 395 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 C2orf83Q53S99 150 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 GPR107Q5VW38 600 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 PRSS54Q6PEW0 395 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 STXBP6Q8NFX7 210 aa11.21□□□□□ -0.61
SMAD5-205ENST00000509297 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms