RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 WFDC10AQ9H1F0 79 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 RANGRFQ9HD47 186 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 SCP2D1Q9UJQ7 156 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 IGHV3OR16-8A0A075B7F1 116 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 A0A0B4J2A0 478 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 A0A0G2JLM5 398 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 C9orf170A2RU37 121 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 OR2T8A6NH00 312 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 C2orf70A6NJV1 201 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 TGOLN2O43493 480 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 SAP30O75446 220 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 ADAP1O75689 374 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 SNAPC5O75971 98 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 DUS4LO95620 317 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 MT-CO2P00403 227 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 ARL3P36405 182 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 DHRS2Q13268 280 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 RBMS2Q15434 407 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 OR4A16Q8NH70 328 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 MRAPQ8TCY5 172 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 DEDD2Q8WXF8 326 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 TMEM190Q8WZ59 177 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 DPF1Q92782 380 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 TSC22D3Q99576 134 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 LYSTQ99698 3801 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 ZNF436Q9C0F3 470 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 C20orf85Q9H1P6 137 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 PLEKHA3Q9HB20 300 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 HSPB7Q9UBY9 170 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 MLXQ9UH92 298 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 SHPKQ9UHJ6 478 aa5.43□□□□□ -1.54
TOPBP1-207ENST00000509162 C15orf62A8K5M9 175 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 PRSS46E5RG02 174 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 LYRM1O43325 122 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 B3GALNT1O75752 331 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 TMEM50AO95807 157 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 CLEC3BP05452 202 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 CTSGP08311 255 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 GP9P14770 177 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 HIST1H1BP16401 226 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 ZP3P21754 424 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 FAUP35544 74 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 HOXA1P49639 335 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 AP3S2P59780 193 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 RAB32Q13637 225 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 RPEL1Q2QD12 228 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 TMEM128Q5BJH2 165 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 SLC25A24Q6NUK1 477 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 SGPP2Q8IWX5 399 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 CENPSQ8N2Z9 138 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 VN1R17PQ8TDU5 208 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 EEF1AKMT3Q96AZ1 226 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 OR4C12Q96R67 309 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 SLC25A21Q9BQT8 299 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 SEC22CQ9BRL7 303 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 AIFM2Q9BRQ8 373 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 MCRIP2Q9BUT9 160 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 CCDC32Q9BV29 185 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 RBKSQ9H477 322 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 C21orf62Q9NYP8 219 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 DNAH6Q9C0G6 4158 aa5.42□□□□□ -1.54
TOPBP1-207ENST00000509162 A0A1B0GU03 582 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 LGALS9O00182 355 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 CCSO14618 274 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 ZNF207O43670 478 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 GGCTO75223 188 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 UPK1BO75841 260 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 CCNKO75909 580 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 IGKV1-17P01599 117 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 HOXB5P09067 269 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 OR4E1P0C645 316 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 C8orf88P0DMB2 117 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 SULT1A3P0DMM9 295 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 SULT1A4P0DMN0 295 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 IAPPP10997 89 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 FOLR2P14207 255 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 S100GP29377 79 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 FCGR2BP31994 310 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 SPCS3P61009 180 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 TNFRSF9Q07011 255 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 ASAH1Q13510 395 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 SMCO1Q147U7 214 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 CD300EQ496F6 205 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 GGNBP1Q5YKI7 109 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 BTNL8Q6UX41 500 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 LINC00299Q6ZSB3 139 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 HSD17B13Q7Z5P4 300 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 LYG2Q86SG7 212 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 TMEM61Q8N0U2 210 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 LGI3Q8N145 548 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 OR52E5Q8NH55 327 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 C11orf1Q9H5F2 150 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 SIGLEC8Q9NYZ4 499 aa5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 ZNF256Q9Y2P7 627 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-207ENST00000509162 SORL1Q92673 2214 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 IGKV1D-37A0A075B6S9 117 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 TRAV6A0A075B6T7 132 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 IGKV1OR2-108A0A075B7D4 117 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms