RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 OR13C7P0DN81 318 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 TAS2R19P59542 299 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 PAFAH1B2P68402 229 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 RELQ04864 619 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-211ENST00000508546 WT1-ASQ06250 92 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 MSMO1Q15800 293 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 SPAG16Q8N0X2 631 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 DUSP18Q8NEJ0 188 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 GPHA2Q96T91 129 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 IFT46Q9NQC8 304 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 COPZ2Q9P299 210 aa6.79□□□□□ -1.32
NEDD9-211ENST00000508546 ELF5Q9UKW6 265 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-211ENST00000508546 F11RQ9Y624 299 aaKnown RBP6.79□□□□□ -1.32
NEDD9-211ENST00000508546 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-211ENST00000508546 DEFB131BA0A096LNP1 70 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 K7EIM0 57 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 HPRT1P00492 218 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 FCER2P06734 321 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 GIG44P09565 113 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-211ENST00000508546 AKAIN1P0CW23 69 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 TRAPPC2P0DI81 140 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 TRAPPC2BP0DI82 140 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 NQO2P16083 231 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 CBX5P45973 191 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 BCAP31P51572 246 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 FAAP20Q6NZ36 180 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 Q6ZR54 194 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 GBGT1Q8N5D6 347 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 TMEM229BQ8NBD8 167 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 ZBTB34Q8NCN2 500 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 OR4C16Q8NGL9 310 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 NDUFAF3Q9BU61 184 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 MCUBQ9NWR8 336 aa6.78□□□□□ -1.32
NEDD9-211ENST00000508546 IGHV3-49A0A0A0MS15 119 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 TRAV14DV4A0A0A6YYC5 116 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 NUPL2O15504 423 aaKnown RBP6.77□□□□□ -1.33
NEDD9-211ENST00000508546 SSX5O60225 188 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 CD3DP04234 171 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 SPP1P10451 314 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 TBPP20226 339 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 CCR6P51684 374 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 DEFB131AP59861 70 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 CATR1Q13166 79 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 Q56UQ5 140 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 RNASE10Q5GAN6 216 aaKnown RBP6.77□□□□□ -1.33
NEDD9-211ENST00000508546 LEMD1Q68G75 181 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 STEAP1BQ6NZ63 245 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 MORN3Q6PF18 240 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-211ENST00000508546 TCF24Q7RTU0 167 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 STHQ8IWL8 128 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 UBAC2Q8NBM4 344 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 OR1L8Q8NGR8 309 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 PLEKHA2Q9HB19 425 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 SCRT2Q9NQ03 307 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 CCL28Q9NRJ3 127 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 NDUFA4L2Q9NRX3 87 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 TMEM140Q9NV12 185 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 ANXA10Q9UJ72 324 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 ANAPC10Q9UM13 185 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 X6R8D5 127 aa6.77□□□□□ -1.33
NEDD9-211ENST00000508546 TEX50A0A1B0GTY4 177 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 M0QYG6 137 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 TNFSF12O43508 249 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 PFDN1O60925 122 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 RAB3DO95716 219 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 CD74P04233 296 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 TCRBP04435 133 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 HLA-DMAP28067 261 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 MEF2DQ14814 521 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 C12orf74Q32Q52 190 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 SOHLH1Q5JUK2 328 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
NEDD9-211ENST00000508546 CADM3Q8N126 398 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 DMBX1Q8NFW5 382 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 OR4D10Q8NGI6 311 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 SECTM1Q8WVN6 248 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 GIMAP1Q8WWP7 306 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 LSM10Q969L4 123 aaKnown RBP6.76□□□□□ -1.33
NEDD9-211ENST00000508546 TXN2Q99757 166 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 GINS3Q9BRX5 216 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 MARVELD1Q9BSK0 173 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 C20orf85Q9H1P6 137 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 MS4A6AQ9H2W1 248 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 VSIRQ9H7M9 311 aa6.76□□□□□ -1.33
NEDD9-211ENST00000508546 TRAV6A0A075B6T7 132 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 IGHV3OR16-13A0A075B7E8 117 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 IGHV3-74A0A0B4J1X5 117 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 A0A0B4J293 547 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 DISC1C4P0D8 188 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 INMT-MINDY4F8WBC2 141 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 DNASE2O00115 360 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-211ENST00000508546 YIF1AO95070 293 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 NDUFB6O95139 128 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 NAT1P18440 290 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 HRH1P35367 487 aa6.75□□□□□ -1.33
NEDD9-211ENST00000508546 MFAP4P55083 255 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms