RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GINS3Q9BRX5 216 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 A0A1B0GU03 582 aa14.97□□□□□ -0.01
SFXN1-209ENST00000508290 CEBPZOSA8MTT3 80 aa14.97□□□□□ -0.01
SFXN1-209ENST00000508290 C2orf83Q53S99 150 aa14.97□□□□□ -0.01
SFXN1-209ENST00000508290 CENPSQ8N2Z9 138 aa14.97□□□□□ -0.01
SFXN1-209ENST00000508290 WDR89Q96FK6 387 aaPredicted RBP14.97□□□□□ -0.01
SFXN1-209ENST00000508290 OR10C1Q96KK4 312 aa14.97□□□□□ -0.01
SFXN1-209ENST00000508290 SPAG8Q99932 426 aaPredicted RBP14.97□□□□□ -0.01
SFXN1-209ENST00000508290 C20orf24Q9BUV8 137 aa14.97□□□□□ -0.01
SFXN1-209ENST00000508290 TRAV30A0A087WSZ9 112 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 CD5P06127 495 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 SLC25A6P12236 298 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 EDN2P20800 178 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 VAMP1P23763 118 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 OPRK1P41145 380 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 CNPY1Q3B7I2 92 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 LINC00299Q6ZSB3 139 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 SLC24A4Q8NFF2 622 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 OR52B4Q8NGK2 314 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 TM2D3Q9BRN9 247 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 HSPB7Q9UBY9 170 aa14.96□□□□□ -0.01
SFXN1-209ENST00000508290 TSPAN4O14817 238 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 YIF1AO95070 293 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 SLC25A4P12235 298 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 TNFRSF9Q07011 255 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 ETFRF1Q6IPR1 90 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 ZNF600Q6ZNG1 722 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 LYZL2Q7Z4W2 148 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 OR4X1Q8NH49 305 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 TMED3Q9Y3Q3 217 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 U3KQ87 197 aa14.95□□□□□ -0.02
SFXN1-209ENST00000508290 CLN5O75503 358 aa14.94□□□□□ -0.02
SFXN1-209ENST00000508290 BAK1Q16611 211 aa14.94□□□□□ -0.02
SFXN1-209ENST00000508290 RCHY1Q96PM5 261 aa14.94□□□□□ -0.02
SFXN1-209ENST00000508290 DNAH9Q9NYC9 4486 aa14.94□□□□□ -0.02
SFXN1-209ENST00000508290 OR11H12B2RN74 326 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 FAM90A26D6RGX4 464 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 NDUFB6O95139 128 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 SFT2D2O95562 160 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 TMEM50AO95807 157 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 CD7P09564 240 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 NPY1RP25929 384 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 SPATA25Q9BR10 227 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 SMPXQ9UHP9 88 aa14.93□□□□□ -0.02
SFXN1-209ENST00000508290 TRAV14DV4A0A0A6YYC5 116 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 IGHV7-4-1A0A0J9YVY3 117 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 OR4C46A6NHA9 309 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 SCAF4O95104 1147 aaKnown RBP14.92□□□□□ -0.02
SFXN1-209ENST00000508290 IGHV3-48P01763 117 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 TMEM116Q8NCL8 245 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 OR1S1Q8NH92 325 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 DTD1Q8TEA8 209 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 FAM110AQ9BQ89 295 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 FNDC4Q9H6D8 234 aaPredicted RBP14.92□□□□□ -0.02
SFXN1-209ENST00000508290 TMEM231Q9H6L2 316 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 PRR13Q9NZ81 148 aa14.92□□□□□ -0.02
SFXN1-209ENST00000508290 IL7P13232 177 aa14.91□□□□□ -0.02
SFXN1-209ENST00000508290 PPP1R1AQ13522 171 aa14.91□□□□□ -0.02
SFXN1-209ENST00000508290 TOMM20LQ6UXN7 152 aa14.91□□□□□ -0.02
SFXN1-209ENST00000508290 LINC00322Q6ZN03 302 aaPredicted RBP14.91□□□□□ -0.02
SFXN1-209ENST00000508290 RHPN1-AS1Q9BWJ2 59 aa14.91□□□□□ -0.02
SFXN1-209ENST00000508290 MED6O75586 246 aa14.9□□□□□ -0.02
SFXN1-209ENST00000508290 IFNA10P01566 189 aa14.9□□□□□ -0.02
SFXN1-209ENST00000508290 CMC4P56277 68 aaPredicted RBP14.9□□□□□ -0.02
SFXN1-209ENST00000508290 HAGHQ16775 308 aa14.9□□□□□ -0.02
SFXN1-209ENST00000508290 OR1S2Q8NGQ3 325 aa14.9□□□□□ -0.02
SFXN1-209ENST00000508290 SDHCQ99643 169 aaPredicted RBP14.9□□□□□ -0.02
SFXN1-209ENST00000508290 PUS1Q9Y606 427 aaKnown RBP eCLIP14.9□□□□□ -0.02
SFXN1-209ENST00000508290 CHEK1O14757 476 aa14.89□□□□□ -0.03
SFXN1-209ENST00000508290 PITX3O75364 302 aa14.89□□□□□ -0.03
SFXN1-209ENST00000508290 DEFB125Q8N687 156 aa14.89□□□□□ -0.03
SFXN1-209ENST00000508290 ZNF414Q96IQ9 312 aa14.89□□□□□ -0.03
SFXN1-209ENST00000508290 CIB3Q96Q77 187 aaPredicted RBP14.89□□□□□ -0.03
SFXN1-209ENST00000508290 SRD5A3Q9H8P0 318 aa14.89□□□□□ -0.03
SFXN1-209ENST00000508290 STAB2Q8WWQ8 2551 aa14.89□□□□□ -0.03
SFXN1-209ENST00000508290 TENM3Q9P273 2699 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 A0A1W2PS18 150 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 ZNF207O43670 478 aaKnown RBP14.88□□□□□ -0.03
SFXN1-209ENST00000508290 PAFAH1B2P68402 229 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 PRSS54Q6PEW0 395 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 COQ8AQ8NI60 647 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 NARS2Q96I59 477 aaKnown RBP14.88□□□□□ -0.03
SFXN1-209ENST00000508290 CCDC32Q9BV29 185 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 RBKSQ9H477 322 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 ZFAND3Q9H8U3 227 aa14.88□□□□□ -0.03
SFXN1-209ENST00000508290 IGHV3OR16-8A0A075B7F1 116 aa14.87□□□□□ -0.03
SFXN1-209ENST00000508290 YPEL3P61236 119 aaPredicted RBP14.87□□□□□ -0.03
SFXN1-209ENST00000508290 RPP30P78346 268 aaKnown RBP14.87□□□□□ -0.03
SFXN1-209ENST00000508290 METTL26Q96S19 204 aa14.87□□□□□ -0.03
SFXN1-209ENST00000508290 VSIRQ9H7M9 311 aa14.87□□□□□ -0.03
SFXN1-209ENST00000508290 C9orf170A2RU37 121 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 NXPH3O95157 252 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 IGLC1P0CG04 106 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 NPPCP23582 126 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 GPX4P36969 197 aaPredicted RBP14.86□□□□□ -0.03
SFXN1-209ENST00000508290 RND2P52198 227 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 RAB11AP62491 216 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 Q8WTZ3 238 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 S100ZQ8WXG8 99 aa14.86□□□□□ -0.03
SFXN1-209ENST00000508290 RNF2Q99496 336 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 317.3 ms