RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CXCL16Q9H2A7 254 aa5.74□□□□□ -1.49
PDGFRA-206ENST00000508170 CA10Q9NS85 328 aa5.74□□□□□ -1.49
PDGFRA-206ENST00000508170 CACNG5Q9UF02 275 aa5.74□□□□□ -1.49
PDGFRA-206ENST00000508170 INSL5Q9Y5Q6 135 aa5.74□□□□□ -1.49
PDGFRA-206ENST00000508170 FLVCR1Q9Y5Y0 555 aa5.74□□□□□ -1.49
PDGFRA-206ENST00000508170 RALGAPA2Q2PPJ7 1873 aa5.74□□□□□ -1.49
PDGFRA-206ENST00000508170 A8MUN3 132 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 B4DEV8 164 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 K7EQG2 157 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 GABARAPO95166 117 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 KRASP01116 189 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 GABARAPL2P60520 117 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 CLLU1OSQ5K130 101 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 Q6ZS49 121 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 SVBPQ8N300 66 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 ZNF555Q8NEP9 628 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 RHOXF1Q8NHV9 184 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 CIB3Q96Q77 187 aaPredicted RBP5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 RPRMQ9NS64 109 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 FKBP11Q9NYL4 201 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 C2orf16Q68DN1 1984 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 CENPFP49454 3210 aa5.73□□□□□ -1.49
PDGFRA-206ENST00000508170 IGHV1OR15-1A0A075B7D0 117 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 IGHV1-69-2A0A0G2JMI3 117 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 MEIS3P1A6NDR6 274 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 TMEM250H0YL14 139 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 LST1O00453 97 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 HLA-DQB1P01920 261 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 OR10J1P30954 320 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 OPRM1P35372 400 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 LINC00313P59037 77 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 TGIF1Q15583 401 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 UBE2NLQ5JXB2 153 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 CXCL17Q6UXB2 119 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 RPS19BP1Q86WX3 136 aaKnown RBP5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 DRAM1Q8N682 238 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 OR2T10Q8NGZ9 312 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 OR4K13Q8NH42 304 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 FLVCR1-AS1Q8TAF5 88 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 RPS4Y2Q8TD47 263 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 DDB2Q92466 427 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 PDCD11Q14690 1871 aaKnown RBP5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 ZNF638Q14966 1978 aaKnown RBP5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 TRGV8A0A0C4DH27 118 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 FSTL3O95633 263 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 TNFP01375 233 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 ZNF286BP0CG31 522 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 INAFM2P0DMQ5 153 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 NFYBP25208 207 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 PSMB8P28062 276 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 KIAA0087Q14695 138 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 PEA15Q15121 130 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 C9orf57Q5W0N0 161 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 GGNQ86UU5 652 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 ZNF709Q8N972 641 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 TMEM243Q9BU79 118 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 CTSZQ9UBR2 303 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 RARRES3Q9UL19 164 aa5.72□□□□□ -1.49
PDGFRA-206ENST00000508170 COLCA2A8K830 154 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 LGALS9O00182 355 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 PDCD5O14737 125 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 HCRTO43612 131 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 OR5AC1P0C628 307 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 IGLC1P0CG04 106 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 LMO2P25791 158 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 ACVRL1P37023 503 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 ERVK-16P61578 105 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 DEFA5Q01523 94 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 DIAPH2-AS1Q14236 149 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 HES1Q14469 280 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 C1orf174Q8IYL3 243 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 DEFB106AQ8N104 65 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 DPH3Q96FX2 82 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 DPY30Q9C005 99 aa5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 WDR61Q9GZS3 305 aaKnown RBP5.71□□□□□ -1.49
PDGFRA-206ENST00000508170 COX7A2P2O60397 106 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 KLF7O75840 302 aaPredicted RBP5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 SDC2P34741 201 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 HES3Q5TGS1 186 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 TMUB2Q71RG4 321 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 RPS27LQ71UM5 84 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 STPG4Q8N801 248 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 ZFP62Q8NB50 900 aaPredicted RBP5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 SGMS2Q8NHU3 365 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 MRPL30Q8TCC3 161 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 CCL13Q99616 98 aa5.71□□□□□ -1.5
PDGFRA-206ENST00000508170 ZFC3H1O60293 1989 aaKnown RBP5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 TRAV41A0A0B4J266 112 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 ODAMA1E959 279 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 IFITM1P13164 125 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 PI3P19957 117 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 PLGLB1Q02325 96 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 MSMO1Q15800 293 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 LINC00596Q86U02 117 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 LRP11Q86VZ4 500 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 NR2C2APQ86WQ0 139 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 ATG5Q9H1Y0 275 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 TAAR3PQ9P1P4 343 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 MPC1Q9Y5U8 109 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 TSC2P49815 1807 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms