RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TRAV5A0A0B4J249 113 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 B9A039 149 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 F6UZH7 168 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 COX7A1P24310 79 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 FOXL1Q12952 345 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 TMEM177Q53S58 311 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
DDX41-208ENST00000507955 WNK2Q9Y3S1 2297 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 ADMP35318 185 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 CA7P43166 264 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 RHOBP62745 196 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 RAB31Q13636 194 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 PSG5Q15238 335 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 ASPHD1Q5U4P2 390 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 HCP5Q6MZN7 132 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 FRMD6-AS1P0C7T7 363 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 ADORA2A-AS1P86434 159 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 TEX38Q6PEX7 206 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 ZNF503Q96F45 646 aa11.69□□□□□ -0.54
DDX41-208ENST00000507955 GRIFINA4D1Z8 144 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 ZNF90Q03938 601 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 C2orf83Q53S99 150 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 ZNF841Q6ZN19 808 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 UHRF2Q96PU4 802 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 TMEM133Q9H2Q1 129 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 KAAG1Q9UBP8 84 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 SLC17A3O00476 420 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 CD33P20138 364 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 CASP6P55212 293 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 CD69Q07108 199 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 TMEM30BQ3MIR4 351 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 WASHC3Q9Y3C0 194 aa11.68□□□□□ -0.54
DDX41-208ENST00000507955 OR7C2O60412 319 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 PPOXP50336 477 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 LINC00310P59036 64 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 NOL4LQ96MY1 436 aaPredicted RBP11.67□□□□□ -0.54
DDX41-208ENST00000507955 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 A0A1W2PPI3 338 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 EREGO14944 169 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 CBLN1P23435 193 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 TAS2R60P59551 318 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 ERHP84090 104 aaKnown RBP11.67□□□□□ -0.54
DDX41-208ENST00000507955 LY6DQ14210 128 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 ZNF672Q499Z4 452 aaPredicted RBP11.67□□□□□ -0.54
DDX41-208ENST00000507955 NPIPB3Q92617 1050 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
DDX41-208ENST00000507955 USF1P22415 310 aaPredicted RBP11.66□□□□□ -0.54
DDX41-208ENST00000507955 TMEM167AQ8TBQ9 72 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 AREGP15514 252 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 RAB4BP61018 213 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 OR5I1Q13606 314 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 LDLRAD2Q5SZI1 272 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 OR10G8Q8NGN5 311 aa11.66□□□□□ -0.54
DDX41-208ENST00000507955 CD24P25063 80 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 CRYBB3P26998 211 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
DDX41-208ENST00000507955 POLR3KQ9Y2Y1 108 aaPredicted RBP11.65□□□□□ -0.54
DDX41-208ENST00000507955 PPIAL4CA0A0B4J2A2 164 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 A0A1W2PRD5 423 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 A0A1W2PRF3 423 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 A0A1W2PRM7 423 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 LINC00311Q8N616 119 aa11.65□□□□□ -0.54
DDX41-208ENST00000507955 GSX1Q9H4S2 264 aaPredicted RBP11.65□□□□□ -0.54
DDX41-208ENST00000507955 DLL1O00548 723 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 SCGB1D1O95968 90 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 MFAP2P55001 183 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 TNXAQ16473 311 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 IQCJQ1A5X6 159 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 ZNF596Q8TC21 504 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 F2Z2F3 143 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 MOSP00540 346 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 PYYP10082 97 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 KLRB1Q12918 225 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 BEND2Q8NDZ0 799 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 TXNDC17Q9BRA2 123 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 INSIG2Q9Y5U4 225 aa11.64□□□□□ -0.55
DDX41-208ENST00000507955 FCN1O00602 326 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 IGLV1-47P01700 117 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 SUMO1P63165 101 aaKnown RBP11.63□□□□□ -0.55
DDX41-208ENST00000507955 USF2Q15853 346 aaPredicted RBP11.63□□□□□ -0.55
DDX41-208ENST00000507955 SSX8Q7RTT4 187 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 C11orf52Q96A22 123 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 SLC35E1Q96K37 410 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 CACNA1BQ00975 2339 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 GGTLC3B5MD39 225 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 C22orf46C9J442 243 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms