RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TMEM187Q14656 261 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 RBMS2Q15434 407 aaKnown RBP8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 SP6Q3SY56 376 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 CCDC71LQ8N9Z2 235 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 OR4D10Q8NGI6 311 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 OR13C8Q8NGS7 320 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 RNASE11Q8TAA1 199 aaKnown RBP8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 MFFQ9GZY8 342 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 FNDC4Q9H6D8 234 aaPredicted RBP8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 TMEM231Q9H6L2 316 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 ENY2Q9NPA8 101 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 COPZ2Q9P299 210 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 MTFP1Q9UDX5 166 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 RABAC1Q9UI14 185 aa8.44□□□□□ -1.06
HMGCS1-204ENST00000507293 CLN5O75503 358 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 TBPP20226 339 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 NPPCP23582 126 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 UCP1P25874 307 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 OPRK1P41145 380 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 ALDH3B2P48448 385 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 MLANAQ16655 118 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 LGALS9CQ6DKI2 356 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 STXBP6Q8NFX7 210 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 AP3S1Q92572 193 aa8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 NAA50Q9GZZ1 169 aaKnown RBP8.43□□□□□ -1.06
HMGCS1-204ENST00000507293 A0A1W2PS18 150 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 GABARAPO95166 117 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 RAB3DO95716 219 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 CD74P04233 296 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 IFNA4P05014 189 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 ZNF182P17025 639 aaPredicted RBP8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 RPL5P46777 297 aaKnown RBP8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 P2RY1P47900 373 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 TIGITQ495A1 244 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 SCGB2B2Q4G0G5 96 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 GPR107Q5VW38 600 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 STHQ8IWL8 128 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 TMEM229BQ8NBD8 167 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 OR4X1Q8NH49 305 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 TERB2Q8NHR7 220 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 ZFAND1Q8TCF1 268 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 MARCH1Q8TCQ1 289 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 TMEM230Q96A57 120 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 RRNAD1Q96FB5 475 aaKnown RBP8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 METTL26Q96S19 204 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 ABHD1Q96SE0 405 aa8.42□□□□□ -1.06
HMGCS1-204ENST00000507293 K7EQG2 157 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 CRYBB3P26998 211 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 TAS2R19P59542 299 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 CTF1Q16619 201 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 BSXQ3C1V8 233 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 FAAP20Q6NZ36 180 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 STEAP1BQ6NZ63 245 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 Q6ZRM9 215 aa8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
HMGCS1-204ENST00000507293 RPS10-NUDT3A0A1W2PQS6 291 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 NOL3O60936 208 aaKnown RBP8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 B3GALNT1O75752 331 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 IGKV1-17P01599 117 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 GIG44P09565 113 aaPredicted RBP8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 OR5AC1P0C628 307 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 C4BPBP20851 252 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 SPCS3P61009 180 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 Q8NAQ8 132 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 LHFPL5Q8TAF8 219 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 C2CD4CQ8TF44 421 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 C15orf40Q8WUR7 153 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 GRAMD2BQ96HH9 432 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 NARS2Q96I59 477 aaKnown RBP8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 BCL7BQ9BQE9 202 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 TMEM222Q9H0R3 208 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 MIXL1Q9H2W2 232 aa8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 C14orf166Q9Y224 244 aaKnown RBP8.4□□□□□ -1.06
HMGCS1-204ENST00000507293 TRAV30A0A087WSZ9 112 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 IGHV4-28A0A0C4DH34 117 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 TEX13DA0A0J9YY54 714 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 GABARAPH6UMI1 98 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 CDS2O95674 445 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 SPP1P10451 314 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 HTR2BP41595 481 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RND2P52198 227 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 TMBIM6P55061 237 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 PRR20EP86478 221 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 PRR20CP86479 221 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 PRR20DP86480 221 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 PRR20BP86481 221 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 PRR20AP86496 221 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 ACTL10Q5JWF8 245 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 MORN3Q6PF18 240 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 CLVS1Q8IUQ0 354 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 FAM219AQ8IW50 185 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 OR52E5Q8NH55 327 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 DCANP1Q8TF63 244 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms