RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SPANXN5Q5MJ07 72 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 TMEM14EPQ6UXP3 125 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
TCOF1-210ENST00000506767 STRAPQ9Y3F4 350 aaKnown RBP9.86□□□□□ -0.83
TCOF1-210ENST00000506767 CMYA5Q8N3K9 4069 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 RPS10-NUDT3A0A1W2PQS6 291 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 H3BP45 60 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 GGCTO75223 188 aaKnown RBP9.85□□□□□ -0.83
TCOF1-210ENST00000506767 DEDDO75618 318 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 IGHV3-48P01763 117 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 IFNA4P05014 189 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 CTSGP08311 255 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 SLC25A4P12235 298 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 GPR183P32249 361 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 ARL3P36405 182 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 GPX4P36969 197 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-210ENST00000506767 SLURP1P55000 103 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 KLF5Q13887 457 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-210ENST00000506767 ETFRF1Q6IPR1 90 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 PRSS54Q6PEW0 395 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 SPSB3Q6PJ21 355 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 Q6ZNX1 250 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 TMEM116Q8NCL8 245 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 PPP1R1CQ8WVI7 109 aa9.85□□□□□ -0.83
TCOF1-210ENST00000506767 DLX4Q92988 240 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-210ENST00000506767 BSCL2Q96G97 398 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-210ENST00000506767 GAR1Q9NY12 217 aaKnown RBP9.85□□□□□ -0.83
TCOF1-210ENST00000506767 OR2T8A6NH00 312 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 H0YIZ8 118 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 L7N2F9 121 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 TGOLN2O43493 480 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 CLN5O75503 358 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 PVALBP20472 110 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-210ENST00000506767 ADMP35318 185 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 NPBWR1P48145 328 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 S100A10P60903 97 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 VAMP2P63027 116 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 RPEL1Q2QD12 228 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 Q56UQ5 140 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 ACSM6Q6P461 480 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 GPHB5Q86YW7 130 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 CACNG8Q8WXS5 425 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 DCUN1D4Q92564 292 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 CHRDL1Q9BU40 450 aa9.84□□□□□ -0.83
TCOF1-210ENST00000506767 ZNF436Q9C0F3 470 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-210ENST00000506767 GNG7O60262 68 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 CCNKO75909 580 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 OR2C1O95371 312 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 MPC2O95563 127 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 RLN2P04090 185 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 GAMTQ14353 236 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 SLC16A13Q7RTY0 426 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 UBAC2Q8NBM4 344 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 ASB13Q8WXK3 278 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 RNF126Q9BV68 326 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 LYRM2Q9NU23 88 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-210ENST00000506767 OR5AC2Q9NZP5 309 aa9.83□□□□□ -0.84
TCOF1-210ENST00000506767 PAIP2BQ9ULR5 123 aaKnown RBP9.83□□□□□ -0.84
TCOF1-210ENST00000506767 FAM24AA6NFZ4 105 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 E5RGE8 158 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 LGALS9O00182 355 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 OVOL1O14753 267 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 GIPP09681 153 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-210ENST00000506767 METTL15P1P0C7V9 234 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 CD33P20138 364 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 LRRC37A5PQ49AS3 106 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 HAPLN4Q86UW8 402 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
TCOF1-210ENST00000506767 TRAV30A0A087WSZ9 112 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 IGSF23A1L1A6 192 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 NUPL2O15504 423 aaKnown RBP9.81□□□□□ -0.84
TCOF1-210ENST00000506767 IGLC1P0CG04 106 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 LYL1P12980 280 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 P2RY1P47900 373 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 RND2P52198 227 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 SYNJ2BPP57105 145 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 ARL16Q0P5N6 197 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 REC114Q7Z4M0 266 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 TMEM252Q8N6L7 170 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 OR10P1Q8NGE3 313 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 CHAC2Q8WUX2 184 aa9.81□□□□□ -0.84
TCOF1-210ENST00000506767 RCC1LQ96I51 464 aaKnown RBP9.81□□□□□ -0.84
TCOF1-210ENST00000506767 VWFP04275 2813 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 TRAV14DV4A0A0A6YYC5 116 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 FNDC10F2Z333 226 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 NDUFA4O00483 81 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 WIPF1O43516 503 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 SCAF4O95104 1147 aaKnown RBP9.8□□□□□ -0.84
TCOF1-210ENST00000506767 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 PET100P0DJ07 73 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 BCAP31P51572 246 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 CAV2P51636 162 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 RAP2BP61225 183 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 DLK1P80370 383 aa9.8□□□□□ -0.84
TCOF1-210ENST00000506767 RELQ04864 619 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms