RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TMEM116Q8NCL8 245 aa12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 TRIM63Q969Q1 353 aa12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 TXN2Q99757 166 aa12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 CACNG5Q9UF02 275 aa12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 V9GYH0 126 aa12.38□□□□□ -0.43
PDLIM7-215ENST00000506161 TFPI2P48307 235 aa12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 SURF2Q15527 256 aaPredicted RBP12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 ZNF79Q15937 498 aa12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 TMEM268Q5VZI3 342 aa12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 MCFD2Q8NI22 146 aa12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 RBPMSQ93062 196 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 RBM38Q9H0Z9 239 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDLIM7-215ENST00000506161 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-215ENST00000506161 RELQ04864 619 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-215ENST00000506161 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
PDLIM7-215ENST00000506161 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
PDLIM7-215ENST00000506161 RRNAD1Q96FB5 475 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-215ENST00000506161 TMEM56-RWDD3S4R434 201 aa12.36□□□□□ -0.43
PDLIM7-215ENST00000506161 IGKV1-17P01599 117 aa12.35□□□□□ -0.43
PDLIM7-215ENST00000506161 SNCAP37840 140 aa12.35□□□□□ -0.43
PDLIM7-215ENST00000506161 KLF9Q13886 244 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-215ENST00000506161 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
PDLIM7-215ENST00000506161 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-215ENST00000506161 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
PDLIM7-215ENST00000506161 TRAV14DV4A0A0A6YYC5 116 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 FABP12A6NFH5 140 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 JTBO76095 146 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 SPCS3P61009 180 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 TIGITQ495A1 244 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 LAMTOR1Q6IAA8 161 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 DUSP18Q8NEJ0 188 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 PRRT1Q99946 306 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 PDCD10Q9BUL8 212 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
PDLIM7-215ENST00000506161 CLN5O75503 358 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 DFFBO76075 338 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 ATG12O94817 140 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 OPRK1P41145 380 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 DHODHQ02127 395 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 FAM219AQ8IW50 185 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 GALNT14Q96FL9 552 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 RSL24D1Q9UHA3 163 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 PLECQ15149 4684 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-215ENST00000506161 OR4C46A6NHA9 309 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 AKR1C4P17516 323 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 NPBWR1P48145 328 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 PRSS54Q6PEW0 395 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 OR4X1Q8NH49 305 aa12.32□□□□□ -0.44
PDLIM7-215ENST00000506161 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 IGLC1P0CG04 106 aa12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 C2orf83Q53S99 150 aa12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 CCDC190Q86UF4 302 aa12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 RABL2AQ9UBK7 228 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
PDLIM7-215ENST00000506161 CEBPZOSA8MTT3 80 aa12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 CORTO00230 105 aa12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 NOL3O60936 208 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 RND2P52198 227 aa12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 RBMS2Q15434 407 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 SLC24A4Q8NFF2 622 aa12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 ALMS1Q8TCU4 4167 aa12.3□□□□□ -0.44
PDLIM7-215ENST00000506161 SPRY2O43597 315 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 HTR2BP41595 481 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 PYDC2Q56P42 97 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 IL17DQ8TAD2 202 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 IL22RA2Q969J5 263 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 RNF183Q96D59 192 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 RBKSQ9H477 322 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
PDLIM7-215ENST00000506161 A0A0B4J2A0 478 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 CCDC160A6NGH7 325 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 SULT1A3P0DMM9 295 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 SULT1A4P0DMN0 295 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 CRYBB3P26998 211 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 APOC4P55056 127 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 TNFRSF9Q07011 255 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 Q6ZWC4 215 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 HSPB7Q9UBY9 170 aa12.28□□□□□ -0.44
PDLIM7-215ENST00000506161 SHPKQ9UHJ6 478 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms