RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ESDP10768 282 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 ARR3P36575 388 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 REG1BP48304 166 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 SSBP2P81877 361 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 MRPL49Q13405 166 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 PRSS57Q6UWY2 283 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 Q71RC1 249 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 BHLHA15Q7RTS1 189 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 TMEM70Q9BUB7 260 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 TRGV10A0A0A0MS01 117 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 LOC389332A0A1B0GUA5 103 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 OOEPA6NGQ2 149 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 K7EP13 123 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 TNFSF15O95150 251 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 LEPROTL1O95214 131 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 TOMM40O96008 361 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 REG1AP05451 166 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 LINC00869P0C866 280 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 DUTP33316 252 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 RPL24P83731 157 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 PRB3Q04118 309 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 SRSF7Q16629 238 aaKnown RBP eCLIP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 OR10J3Q5JRS4 329 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 ZNF503Q96F45 646 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 AP1S3Q96PC3 154 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 MBNL3Q9NUK0 354 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 F11RQ9Y624 299 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 SVEP1Q4LDE5 3571 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 TRAV30A0A087WSZ9 112 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 GAGE10A6NGK3 116 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 VWC2LB2RUY7 222 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 TMEM238C9JI98 176 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 H3BUT2 72 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 ORM2P19652 201 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 BVES-AS1Q5T3Y7 98 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 SLC25A34Q6PIV7 304 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 C19orf35Q6ZS72 473 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 MOB1BQ7L9L4 216 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 CSTL1Q9H114 145 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 MRPS16Q9Y3D3 137 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 SPTBN1Q01082 2364 aaKnown RBP6.25□□□□□ -1.41
NEDD9-208ENST00000504387 AKAP6Q13023 2319 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 PIGBOS1A0A0B4J2F0 54 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 C2orf70A6NJV1 201 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 C10orf142B7Z368 130 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 P0C879 139 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 DUX4L9Q6RFH8 374 aaPredicted RBP6.24□□□□□ -1.41
NEDD9-208ENST00000504387 MTURNQ8N3F0 131 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 SH3BGRL2Q9UJC5 107 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 AMMECR1Q9Y4X0 333 aaPredicted RBP6.24□□□□□ -1.41
NEDD9-208ENST00000504387 TRAV8-1A0A0A6YYK1 113 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 C7orf71A4D174 169 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 FAM231BA6NCW3 169 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 IGLV2-8P01709 118 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 MT-ND6P03923 174 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 ZGRF1Q86YA3 2104 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 OR2Z1Q8NG97 314 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 OR8A1Q8NGG7 326 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 WFDC12Q8WWY7 111 aa6.24□□□□□ -1.41
NEDD9-208ENST00000504387 FLYWCH2Q96CP2 140 aaKnown RBP6.24□□□□□ -1.41
NEDD9-208ENST00000504387 TRBV6-6A0A0A6YYG2 114 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 TRGV5A0A0B4J1U4 118 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 IZUMO1RA6ND01 250 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 WISP2O76076 250 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 TMEM108Q6UXF1 575 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 MRPL52Q86TS9 123 aaKnown RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 LRRC29Q8WV35 223 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 RAB1CQ92928 201 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 DSCAML1Q8TD84 2053 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 H0YJW9 148 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 KLRC4-KLRK1H3BQV0 150 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 J3QR06 171 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 VDAC2P45880 294 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 C10orf55Q5SWW7 151 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 OR1N2Q8NGR9 330 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 ZNF430Q9H8G1 570 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 ZNF835Q9Y2P0 537 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 CEP192Q8TEP8 1941 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 TMSB15BA0A087X1C1 80 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SPRY3O43610 288 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SMPD2O60906 423 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 IGKV1-16P04430 117 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SLC25A5P05141 298 aaKnown RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SRSF6Q13247 344 aaKnown RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SPRNQ5BIV9 151 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 PEAR1Q5VY43 1037 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SLC35E4Q6ICL7 350 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 KLF14Q8TD94 323 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-208ENST00000504387 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 PKIBQ9C010 78 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 SAP30LQ9HAJ7 183 aa6.23□□□□□ -1.41
NEDD9-208ENST00000504387 ABCA4P78363 2273 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 IGHV1-24A0A0C4DH33 117 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 C9orf172C9J069 976 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 SYS1-DBNDD2H3BUS1 97 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 K7ERU9 68 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 MMP23AO75900 390 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 MOSP00540 346 aa6.22□□□□□ -1.41
NEDD9-208ENST00000504387 AREGP15514 252 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms