RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 ZNF79Q15937 498 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 ODF3L2Q3SX64 289 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 IL17DQ8TAD2 202 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 RNF2Q99496 336 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 ENY2Q9NPA8 101 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.61□□□□□ -0.23
RNF4-204ENST00000503659 IGHV3-49A0A0A0MS15 119 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 NPBWR1P48145 328 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 SUB1P53999 127 aaKnown RBP eCLIP13.6□□□□□ -0.23
RNF4-204ENST00000503659 ZFAND6Q6FIF0 208 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 LAMTOR1Q6IAA8 161 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 TOMM20LQ6UXN7 152 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 TMEM116Q8NCL8 245 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 RHPN1-AS1Q9BWJ2 59 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 GGTLC1Q9BX51 225 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 SACSQ9NZJ4 4579 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 UBQLN2Q9UHD9 624 aa13.6□□□□□ -0.23
RNF4-204ENST00000503659 TMEM50AO95807 157 aa13.59□□□□□ -0.23
RNF4-204ENST00000503659 MLANAQ16655 118 aa13.59□□□□□ -0.23
RNF4-204ENST00000503659 PYDC2Q56P42 97 aa13.59□□□□□ -0.23
RNF4-204ENST00000503659 IL22RA2Q969J5 263 aa13.59□□□□□ -0.23
RNF4-204ENST00000503659 SCGB3A2Q96PL1 93 aa13.59□□□□□ -0.23
RNF4-204ENST00000503659 LOC102724200A0A096LPH7 203 aaPredicted RBP13.58□□□□□ -0.24
RNF4-204ENST00000503659 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 A0A1B0GU03 582 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 AKR1C4P17516 323 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 OPRK1P41145 380 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 CCDC190Q86UF4 302 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 TMEM170AQ8WVE7 144 aa13.58□□□□□ -0.24
RNF4-204ENST00000503659 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
RNF4-204ENST00000503659 LYSTQ99698 3801 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 IGHV3OR16-13A0A075B7E8 117 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 IGHV3-74A0A0B4J1X5 117 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 OR4C46A6NHA9 309 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 ZNF701M0R085 212 aaPredicted RBP13.57□□□□□ -0.24
RNF4-204ENST00000503659 NXPH3O95157 252 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 FAUP35544 74 aaKnown RBP13.57□□□□□ -0.24
RNF4-204ENST00000503659 HTR2BP41595 481 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 NMSQ5H8A3 153 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 FAM90A2PQ658T7 463 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 TOMM5Q8N4H5 51 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 OR4X1Q8NH49 305 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 HEYLQ9NQ87 328 aaPredicted RBP13.57□□□□□ -0.24
RNF4-204ENST00000503659 KCNIP3Q9Y2W7 256 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 RYR2Q92736 4967 aa13.57□□□□□ -0.24
RNF4-204ENST00000503659 A0A0B4J2A0 478 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 CLN5O75503 358 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 APOHP02749 345 aaPredicted RBP13.56□□□□□ -0.24
RNF4-204ENST00000503659 SULT1A3P0DMM9 295 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 SULT1A4P0DMN0 295 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 S100A5P33763 92 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 C2orf83Q53S99 150 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 LYZL2Q7Z4W2 148 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 GINS3Q9BRX5 216 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 VSIRQ9H7M9 311 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 SHPKQ9UHJ6 478 aa13.56□□□□□ -0.24
RNF4-204ENST00000503659 CEBPZOSA8MTT3 80 aa13.55□□□□□ -0.24
RNF4-204ENST00000503659 IGKV1-17P01599 117 aa13.55□□□□□ -0.24
RNF4-204ENST00000503659 AP3S2P59780 193 aa13.55□□□□□ -0.24
RNF4-204ENST00000503659 LILRB2Q8N423 598 aa13.55□□□□□ -0.24
RNF4-204ENST00000503659 ST8SIA2Q92186 375 aa13.55□□□□□ -0.24
RNF4-204ENST00000503659 OVOL2Q9BRP0 275 aa13.55□□□□□ -0.24
RNF4-204ENST00000503659 IGKV3-7A0A075B6H7 116 aa13.54□□□□□ -0.24
RNF4-204ENST00000503659 TMED4Q7Z7H5 227 aa13.54□□□□□ -0.24
RNF4-204ENST00000503659 RNASEH2CQ8TDP1 164 aaKnown RBP13.54□□□□□ -0.24
RNF4-204ENST00000503659 HSPB7Q9UBY9 170 aa13.54□□□□□ -0.24
RNF4-204ENST00000503659 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 RPS10-NUDT3A0A1W2PQS6 291 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 ANXA3P12429 323 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 TFPI2P48307 235 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 CCR6P51684 374 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 SRPXP78539 464 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 TNFRSF9Q07011 255 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 ZNF124Q15973 351 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 TIGITQ495A1 244 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 PRSS54Q6PEW0 395 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 TCF24Q7RTU0 167 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 LGI3Q8N145 548 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 SRRQ9GZT4 340 aa13.53□□□□□ -0.24
RNF4-204ENST00000503659 IGLC1P0CG04 106 aa13.52□□□□□ -0.25
RNF4-204ENST00000503659 NPY1RP25929 384 aa13.52□□□□□ -0.25
RNF4-204ENST00000503659 TMEM128Q5BJH2 165 aa13.52□□□□□ -0.25
RNF4-204ENST00000503659 APRG1Q8IVJ8 170 aa13.52□□□□□ -0.25
RNF4-204ENST00000503659 GBGT1Q8N5D6 347 aa13.52□□□□□ -0.25
RNF4-204ENST00000503659 CACFD1Q9UGQ2 172 aa13.52□□□□□ -0.25
RNF4-204ENST00000503659 DFFBO76075 338 aa13.51□□□□□ -0.25
RNF4-204ENST00000503659 SLC25A4P12235 298 aa13.51□□□□□ -0.25
RNF4-204ENST00000503659 RND2P52198 227 aa13.51□□□□□ -0.25
RNF4-204ENST00000503659 APOC4P55056 127 aa13.51□□□□□ -0.25
RNF4-204ENST00000503659 SLC25A21Q9BQT8 299 aaPredicted RBP13.51□□□□□ -0.25
RNF4-204ENST00000503659 RBKSQ9H477 322 aa13.51□□□□□ -0.25
RNF4-204ENST00000503659 MAP6D1Q9H9H5 199 aa13.51□□□□□ -0.25
RNF4-204ENST00000503659 TRAV30A0A087WSZ9 112 aa13.5□□□□□ -0.25
RNF4-204ENST00000503659 CRYBB3P26998 211 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms