RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MBPP02686 304 aaPredicted RBP12.59□□□□□ -0.39
SCLT1-205ENST00000503401 ADMP35318 185 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 OR9G4Q8NGQ1 327 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 ZNF320A2RRD8 509 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 SAP30O75446 220 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 TMEM50AO95807 157 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 IFNA4P05014 189 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 CTSGP08311 255 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 EDN2P20800 178 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 GSG1LQ6UXU4 331 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 HAPLN4Q86UW8 402 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
SCLT1-205ENST00000503401 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 CIB3Q96Q77 187 aaPredicted RBP12.59□□□□□ -0.39
SCLT1-205ENST00000503401 OR4C12Q96R67 309 aa12.59□□□□□ -0.39
SCLT1-205ENST00000503401 RCL1Q9Y2P8 373 aaKnown RBP12.59□□□□□ -0.39
SCLT1-205ENST00000503401 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 SSNA1O43805 119 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 GNG7O60262 68 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 C9orf66Q5T8R8 295 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 IL34Q6ZMJ4 242 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 GPHB5Q86YW7 130 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 ALG5Q9Y673 324 aa12.58□□□□□ -0.4
SCLT1-205ENST00000503401 PRB2P02812 416 aaPredicted RBP12.57□□□□□ -0.4
SCLT1-205ENST00000503401 FCGR2BP31994 310 aaPredicted RBP12.57□□□□□ -0.4
SCLT1-205ENST00000503401 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
SCLT1-205ENST00000503401 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
SCLT1-205ENST00000503401 NOXA1Q86UR1 476 aa12.57□□□□□ -0.4
SCLT1-205ENST00000503401 TXN2Q99757 166 aa12.57□□□□□ -0.4
SCLT1-205ENST00000503401 LSM5Q9Y4Y9 91 aaKnown RBP12.57□□□□□ -0.4
SCLT1-205ENST00000503401 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 C7orf66A4D0T2 115 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 K7EPK0 472 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 NUPL2O15504 423 aaKnown RBP12.56□□□□□ -0.4
SCLT1-205ENST00000503401 NPBWR1P48145 328 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 PAX9P55771 341 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 KRTAP10-11P60412 298 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 FAM106AQ4KMX7 169 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 ZNF414Q96IQ9 312 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 ELOVL1Q9BW60 279 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 GAR1Q9NY12 217 aaKnown RBP12.56□□□□□ -0.4
SCLT1-205ENST00000503401 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 SORL1Q92673 2214 aa12.56□□□□□ -0.4
SCLT1-205ENST00000503401 CSN3P07498 182 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 RND2P52198 227 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 S100A10P60903 97 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 RAB11AP62491 216 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 CD69Q07108 199 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 SLC16A13Q7RTY0 426 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 OR4X1Q8NH49 305 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 CACNG8Q8WXS5 425 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 WDR89Q96FK6 387 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-205ENST00000503401 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 ZNF436Q9C0F3 470 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-205ENST00000503401 STRAPQ9Y3F4 350 aaKnown RBP12.55□□□□□ -0.4
SCLT1-205ENST00000503401 SELENOKQ9Y6D0 94 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 CLN5O75503 358 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-205ENST00000503401 RPP30P78346 268 aaKnown RBP12.55□□□□□ -0.4
SCLT1-205ENST00000503401 IL15RAQ13261 267 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 RAB32Q13637 225 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-205ENST00000503401 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 REC114Q7Z4M0 266 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 SMIM8Q96KF7 97 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 PEMTQ9UBM1 199 aa12.55□□□□□ -0.4
SCLT1-205ENST00000503401 C2orf70A6NJV1 201 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 LGALS9O00182 355 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 CCNKO75909 580 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 SLC25A4P12235 298 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 H2BFSP57053 126 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 DEFA6Q01524 100 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 ETFRF1Q6IPR1 90 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 NPIPB3Q92617 1050 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 C20orf24Q9BUV8 137 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 MGAT4CQ9UBM8 478 aa12.54□□□□□ -0.4
SCLT1-205ENST00000503401 TMEM213A2RRL7 107 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 NDUFA4O00483 81 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 WIPF1O43516 503 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
SCLT1-205ENST00000503401 YIF1AO95070 293 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-205ENST00000503401 EGFEM1PQ0D2K5 195 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 TIGITQ495A1 244 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 TMEM190Q8WZ59 177 aa12.53□□□□□ -0.4
SCLT1-205ENST00000503401 PRKDCP78527 4128 aaKnown RBP12.53□□□□□ -0.4
SCLT1-205ENST00000503401 PRSS46E5RG02 174 aa12.52□□□□□ -0.4
SCLT1-205ENST00000503401 L7N2F9 121 aa12.52□□□□□ -0.4
SCLT1-205ENST00000503401 LY86O95711 162 aa12.52□□□□□ -0.4
SCLT1-205ENST00000503401 METTL15P1P0C7V9 234 aa12.52□□□□□ -0.4
SCLT1-205ENST00000503401 FOLR2P14207 255 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms