RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 A0A1W2PPI3 338 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 FAM87AP0C7U9 286 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 CASP6P55212 293 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 SSBP2P81877 361 aaPredicted RBP13.35□□□□□ -0.27
VCAN-204ENST00000502527 ETFRF1Q6IPR1 90 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 RITA1Q96K30 269 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 GATCO43716 136 aaKnown RBP13.34□□□□□ -0.27
VCAN-204ENST00000502527 ADMP35318 185 aa13.34□□□□□ -0.27
VCAN-204ENST00000502527 RPL19P84098 196 aaKnown RBP13.34□□□□□ -0.27
VCAN-204ENST00000502527 DEFA6Q01524 100 aa13.34□□□□□ -0.27
VCAN-204ENST00000502527 MORN5Q5VZ52 161 aa13.34□□□□□ -0.27
VCAN-204ENST00000502527 PIEZO2Q9H5I5 2752 aa13.34□□□□□ -0.27
VCAN-204ENST00000502527 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.27
VCAN-204ENST00000502527 IGHV2-26A0A0B4J1V2 119 aa13.33□□□□□ -0.27
VCAN-204ENST00000502527 IGHV3-72A0A0B4J1Y9 119 aa13.33□□□□□ -0.27
VCAN-204ENST00000502527 MRGPRG-AS1Q2M3A8 158 aa13.33□□□□□ -0.27
VCAN-204ENST00000502527 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.27
VCAN-204ENST00000502527 ATMQ13315 3056 aa13.33□□□□□ -0.28
VCAN-204ENST00000502527 PLAUP00749 431 aa13.33□□□□□ -0.28
VCAN-204ENST00000502527 CBLN1P23435 193 aa13.33□□□□□ -0.28
VCAN-204ENST00000502527 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
VCAN-204ENST00000502527 PAXXQ9BUH6 204 aa13.33□□□□□ -0.28
VCAN-204ENST00000502527 TRBV9A0A0B4J1U6 114 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 IGLC7A0M8Q6 106 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 ISLRO14498 428 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 FSTL3O95633 263 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 IGLV1-47P01700 117 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 REG1AP05451 166 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 RPL27AP46776 148 aaKnown RBP13.32□□□□□ -0.28
VCAN-204ENST00000502527 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 IGF2BP2-AS1Q96M15 143 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
VCAN-204ENST00000502527 PCNX1Q96RV3 2341 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 BSNQ9UPA5 3926 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 TAS2R60P59551 318 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 PVRIGQ6DKI7 326 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 MUC15Q8N387 334 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 MRPL36Q9P0J6 103 aaKnown RBP13.32□□□□□ -0.28
VCAN-204ENST00000502527 INSIG2Q9Y5U4 225 aa13.32□□□□□ -0.28
VCAN-204ENST00000502527 PKDREJQ9NTG1 2253 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 CRYGCP07315 174 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 CRYGBP07316 175 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 ZNF841Q6ZN19 808 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 TMEM256Q8N2U0 113 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 BEND2Q8NDZ0 799 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
VCAN-204ENST00000502527 PRO1933Q9H354 126 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 CDC42EP3Q9UKI2 254 aa13.31□□□□□ -0.28
VCAN-204ENST00000502527 LYNX1G3V0Z9 82 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 BUB1B-PAK6H3BSN5 160 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 FCN1O00602 326 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 IGLV2-8P01709 118 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 RBP4P02753 201 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 LYNX1P0DP58 116 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 PYYP10082 97 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 DDTP30046 118 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 TNXAQ16473 311 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 FBXL19-AS1Q494R0 122 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 HCP5Q6MZN7 132 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 LURAP1LQ8IV03 231 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 MISP3Q96FF7 219 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 GNB1LQ9BYB4 327 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 TNFRSF19Q9NS68 423 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 AMMECR1Q9Y4X0 333 aaPredicted RBP13.3□□□□□ -0.28
VCAN-204ENST00000502527 IGHV1-3A0A0C4DH29 117 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 FAM90A27PA6NNH2 459 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 ZNF705GA8MUZ8 300 aaPredicted RBP13.3□□□□□ -0.28
VCAN-204ENST00000502527 MGST1P10620 155 aaKnown RBP13.3□□□□□ -0.28
VCAN-204ENST00000502527 IER3P46695 156 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 CX3CL1P78423 397 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 STXBP6Q8NFX7 210 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 TMUB1Q9BVT8 246 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 SIGLEC9Q9Y336 463 aa13.3□□□□□ -0.28
VCAN-204ENST00000502527 CORTO00230 105 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 CRISP2P16562 243 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 CA7P43166 264 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 COMPP49747 757 aaPredicted RBP13.29□□□□□ -0.28
VCAN-204ENST00000502527 COX19Q49B96 90 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 IBA57Q5T440 356 aaKnown RBP13.29□□□□□ -0.28
VCAN-204ENST00000502527 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 LINC00305Q7Z4B0 112 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 PERPQ96FX8 193 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 TRGV9Q99603 122 aa13.29□□□□□ -0.28
VCAN-204ENST00000502527 PPIAL4CA0A0B4J2A2 164 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 A0A1B0GUS0 222 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 SNURFLB1AK76 121 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 C22orf46C9J442 243 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 PPIAL4GP0DN37 164 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 FXYD3Q14802 87 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 IQCJQ1A5X6 159 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 ZNF329Q86UD4 541 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 CMTM2Q8TAZ6 248 aa13.28□□□□□ -0.28
VCAN-204ENST00000502527 FXYD5Q96DB9 178 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms