RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DLX1P56177 255 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 TGIF2LXQ8IUE1 241 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 C11orf42Q8N5U0 333 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 OR1L6Q8NGR2 347 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 MRPL32Q9BYC8 188 aaKnown RBP7.95□□□□□ -1.14
CLIP1-204ENST00000501271 TP53TG3Q9ULZ0 132 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 DCHS2Q6V1P9 2916 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 CEP295Q9C0D2 2601 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 TACC2O95359 2948 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 MALRD1Q5VYJ5 2156 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 IGHV3-72A0A0B4J1Y9 119 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 A0A1W2PPI3 338 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 A0A1W2PRE2 83 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 IGLV2-8P01709 118 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 IGHV1-8P0DP01 117 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 LINC00310P59036 64 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 SELENOTP62341 195 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 UBE2L3P68036 154 aaKnown RBP7.94□□□□□ -1.14
CLIP1-204ENST00000501271 FXYD3Q14802 87 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 ASCL5Q7RTU5 278 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 OR8I2Q8N0Y5 310 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 OR5AU1Q8NGC0 362 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 NPIPB3Q92617 1050 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 IGF2BP2-AS1Q96M15 143 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
CLIP1-204ENST00000501271 KAAG1Q9UBP8 84 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 RELNP78509 3460 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 LRBAP50851 2863 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 TLN1Q9Y490 2541 aaKnown RBP7.94□□□□□ -1.14
CLIP1-204ENST00000501271 PYYP10082 97 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 IER3P46695 156 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 PRB3Q04118 309 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-204ENST00000501271 RUSC1-AS1Q66K80 236 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 PATE2Q6UY27 113 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 SPACA3Q8IXA5 215 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 DNAJC4Q9NNZ3 241 aa7.94□□□□□ -1.14
CLIP1-204ENST00000501271 TCRBV4S1A1TA0A5B7 111 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 PPOXP50336 477 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 SSX2Q16385 188 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 TBR1Q16650 682 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 TIGITQ495A1 244 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 SSX8Q7RTT4 187 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 REC114Q7Z4M0 266 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 ST6GALNAC3Q8NDV1 305 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 PTPRZ1P23471 2315 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-204ENST00000501271 IGHV1-69-2A0A0G2JMI3 117 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 VSTM5A8MXK1 200 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 SNURFLB1AK76 121 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 SPINK4O60575 86 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 FSTL3O95633 263 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 VMA21Q3ZAQ7 101 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 ASPHD1Q5U4P2 390 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 C10orf113Q5VZT2 155 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 C19orf35Q6ZS72 473 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 THAP8Q8NA92 274 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 NHLRC2Q8NBF2 726 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 CMTM2Q8TAZ6 248 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 LINC00479Q96M42 142 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 TMEM133Q9H2Q1 129 aa7.93□□□□□ -1.14
CLIP1-204ENST00000501271 ZMAT5Q9UDW3 170 aaKnown RBP7.93□□□□□ -1.14
CLIP1-204ENST00000501271 A8MWP6 167 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 F2Z2F3 143 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 FCN1O00602 326 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 ENSAO43768 121 aaKnown RBP7.92□□□□□ -1.14
CLIP1-204ENST00000501271 PLAUP00749 431 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
CLIP1-204ENST00000501271 CNTFRP26992 372 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 SUB1P53999 127 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLIP1-204ENST00000501271 RNF2Q99496 336 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 OSTCQ9NRP0 149 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-204ENST00000501271 IGLC7A0M8Q6 106 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 C22orf46C9J442 243 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 LYNX1G3V0Z9 82 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 ISLRO14498 428 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 MOSP00540 346 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 SNRPCP09234 159 aaKnown RBP7.92□□□□□ -1.14
CLIP1-204ENST00000501271 APELAP0DMC3 54 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 LYNX1P0DP58 116 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 CRISP2P16562 243 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 MC5RP33032 325 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 MFAP2P55001 183 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 TCL1AP56279 114 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 RAB4BP61018 213 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 SLC35B1P78383 322 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 IQCJQ1A5X6 159 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 IBA57Q5T440 356 aaKnown RBP7.92□□□□□ -1.14
CLIP1-204ENST00000501271 HCP5Q6MZN7 132 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 NGBQ9NPG2 151 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 PTPRQQ9UMZ3 2332 aa7.92□□□□□ -1.14
CLIP1-204ENST00000501271 SERF1AO75920 110 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 APOBEC3AP31941 199 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-204ENST00000501271 BPIFB3P59826 476 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 CX3CL1P78423 397 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 FOXC1Q12948 553 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 ZNF329Q86UD4 541 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 LINC00469Q8N7U9 141 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms