RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 M0R135 149 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PSCAO43653 123 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PDE6DO43924 150 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 SNAPINO95295 136 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RPL29P47914 159 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 RAB28P51157 221 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NKX2-5P52952 324 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 FLI1Q01543 452 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 LTB4RQ15722 352 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF404Q494X3 552 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 FAM71F2Q6NXP2 309 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 C16orf47Q6ZP98 133 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF493Q6ZR52 646 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MARCH3Q86UD3 253 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 APRG1Q8IVJ8 170 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ARRDC1Q8N5I2 433 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 OR6C4Q8NGE1 309 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZCCHC10Q8TBK6 192 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 DIRAS2Q96HU8 199 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 BTF3L4Q96K17 158 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MAP1LC3CQ9BXW4 147 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TAS2R8Q9NYW2 309 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PHLDA3Q9Y5J5 127 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ASPMQ8IZT6 3477 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TNRC6BQ9UPQ9 1833 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 ARHGAP32A7KAX9 2087 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 IGKV3D-7A0A0C4DH55 119 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PDZK1P1A8MUH7 402 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 K7ERJ3 54 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 BPY2O14599 106 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 ZNF189O75820 626 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 WNT3P56703 355 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TIRAPP58753 221 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 SELENBP1Q13228 472 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 GCSAMLQ5JQS6 135 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C9orf152Q5JTZ5 239 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 FAM45BPQ6NSW5 357 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 SETD9Q8NE22 299 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR8J3Q8NGG0 315 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CLDND2Q8NHS1 167 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 FAM45AQ8TCE6 357 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 FRG2BQ96QU4 278 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 NRIP2Q9BQI9 281 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CHAC1Q9BUX1 264 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR10A4Q9H209 315 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C12orf10Q9HB07 376 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TBC1D13Q9NVG8 400 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 ORMDL1Q9P0S3 153 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 HSPB11Q9Y547 144 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 GPR45Q9Y5Y3 372 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PTPRBP23467 1997 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TENM4Q6N022 2769 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 DNHD1Q96M86 4753 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 IGKV3-7A0A075B6H7 116 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 HCRTO43612 131 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR6B1O95007 311 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 IFNW1P05000 195 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OTX2P32243 289 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 RPL28P46779 137 aaKnown RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 RSPO1Q2MKA7 263 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 OCIAD2Q56VL3 154 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TTC32Q5I0X7 151 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CDC42EP5Q6NZY7 148 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TMEM136Q6ZRR5 245 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 LINC00336Q6ZUF6 198 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 FAM19A2Q8N3H0 131 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR10T2Q8NGX3 314 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 RNASEH2CQ8TDP1 164 aaKnown RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 C15orf40Q8WUR7 153 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 KCTD14Q9BQ13 255 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 H2AFJQ9BTM1 129 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 KRTAP4-4Q9BYR3 166 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PRTFDC1Q9NRG1 225 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PURGQ9UJV8 347 aaKnown RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 TIMM22Q9Y584 194 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 IGHV3OR16-12A0A075B7B8 117 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 RTL8CO15255 209 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PSG2P11465 335 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CD59P13987 128 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 BLKP51451 505 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 FOXG1P55316 489 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 CLDN17P56750 224 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 LYZP61626 148 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 JOSD1Q15040 202 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 QPRTQ15274 297 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CDSNQ15517 529 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C1orf220Q5T0J3 134 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C1orf189Q5VU69 101 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PRSS54Q6PEW0 395 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 LYPD5Q6UWN5 251 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 SOSTDC1Q6X4U4 206 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CANT1Q8WVQ1 401 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 AGMATQ9BSE5 352 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C1QTNF6Q9BXI9 259 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 AGPAT4-IT1Q9H0P7 198 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 HDHD2Q9H0R4 259 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 SLC35B3Q9H1N7 401 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 DDIT4Q9NX09 232 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 NYAP2Q9P242 653 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms