RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 Q6ZRM9 215 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM158Q8WZ71 300 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 AP5S1Q9NUS5 200 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMSB15BA0A087X1C1 80 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGHV3-21A0A0B4J1V1 117 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 KBTBD11-OT1A0A1B0GTJ5 212 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 A0A1B0GW64 132 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 DPRXA6NFQ7 191 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 RAMP3O60896 148 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 LINC00869P0C866 280 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 PPOXP50336 477 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 BPIFA4PQ86YQ2 179 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 GBGT1Q8N5D6 347 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 SLC25A17O43808 307 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 CIDEAO60543 219 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 ADCYAP1P18509 176 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 CD24P25063 80 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 CFHR2P36980 270 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 SMUG1Q53HV7 270 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR5AU1Q8NGC0 362 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 PXMP4Q9Y6I8 212 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 CBY3A6NI87 242 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM50AO95807 157 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 EGR1P18146 543 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 DUTP33316 252 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 PSMB2P49721 201 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 MFAP2P55001 183 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 HSPE1P61604 102 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 RELBQ01201 579 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 SRSF9Q13242 221 aaKnown RBP eCLIP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 GUSBP1Q15486 140 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 UNQ5815/PRO19632Q6UWF5 114 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 DMRTC2Q8IXT2 367 aaPredicted RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM186Q96B77 213 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 RCC1LQ96I51 464 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 METTL1Q9UBP6 276 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 HSPB8Q9UJY1 196 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 CGAP01215 116 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 SRP19P09132 144 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 HIST1H1BP16401 226 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 CD33P20138 364 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 CEACAM8P31997 349 aaPredicted RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 IER3P46695 156 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 Q6ZPA2 131 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 METTL26Q96S19 204 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 TCF19Q9Y242 345 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 KLF2Q9Y5W3 355 aaPredicted RBP6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 TCRBV4S1A1TA0A5B7 111 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGHV1-46P01743 117 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 PAX9P55771 341 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 RPL39P5Q59GN2 51 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 C11orf53Q8IXP5 236 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR10J6PQ8NGY7 276 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR9G1Q8NH87 305 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 DDB2Q92466 427 aa6.61□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGKV1D-17A0A075B6S4 117 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGHV3-35A0A0C4DH35 117 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 FAM90A9PA6NNJ1 464 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 CRXO43186 299 aaPredicted RBP6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 TM4SF20Q53R12 229 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 C10orf91Q5T1B1 145 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF343Q6P1L6 599 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM14EPQ6UXP3 125 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 FAM216BQ8N7L0 139 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 SGMS2Q8NHU3 365 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 QTRT1Q9BXR0 403 aaKnown RBP6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 LINC00527Q9UJ94 153 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 FUT9Q9Y231 359 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 FAM215AQ9Y5M1 114 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 TRAV1-1A0A0B4J248 108 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGKV1-39P01597 117 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGKV1D-39P04432 117 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 HCP5Q6MZN7 132 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 C16orf92Q96LL3 132 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MIEN1Q9BRT3 115 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF430Q9H8G1 570 aaPredicted RBP6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 NOTCH1P46531 2555 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MT-ND6P03923 174 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MAS1LP35410 378 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MFAP4P55083 255 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 FAM106AQ4KMX7 169 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 PRNTQ86SH4 94 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 CLDND2Q8NHS1 167 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MBD3L1Q8WWY6 194 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 GGACTQ9BVM4 153 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 TRAV30A0A087WSZ9 112 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 RND2P52198 227 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 CCL20P78556 96 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MEF2BQ02080 365 aaPredicted RBP6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 MEF2CQ06413 473 aaPredicted RBP6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 LYPD6BQ8NI32 183 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 LEAP2Q969E1 77 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
HLA-DMB-262ENST00000498020 APCSP02743 223 aa6.59□□□□□ -1.35
HLA-DMB-262ENST00000498020 PET117Q6UWS5 81 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms