RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 ELLP55199 621 aaPredicted RBP17.22■□□□□ 0.35
CHRD-217ENST00000496527 DEFB114Q30KQ6 69 aa17.22■□□□□ 0.35
CHRD-217ENST00000496527 GGNBP1Q5YKI7 109 aa17.22■□□□□ 0.35
CHRD-217ENST00000496527 NOXA1Q86UR1 476 aa17.22■□□□□ 0.35
CHRD-217ENST00000496527 DTD1Q8TEA8 209 aa17.22■□□□□ 0.35
CHRD-217ENST00000496527 CACNG8Q8WXS5 425 aa17.22■□□□□ 0.35
CHRD-217ENST00000496527 TMEM190Q8WZ59 177 aa17.22■□□□□ 0.35
CHRD-217ENST00000496527 CD300EQ496F6 205 aaPredicted RBP17.21■□□□□ 0.35
CHRD-217ENST00000496527 MZT2BQ6NZ67 158 aa17.21■□□□□ 0.35
CHRD-217ENST00000496527 UXS1Q8NBZ7 420 aa17.21■□□□□ 0.35
CHRD-217ENST00000496527 MARC2Q969Z3 335 aa17.21■□□□□ 0.35
CHRD-217ENST00000496527 C20orf24Q9BUV8 137 aa17.21■□□□□ 0.35
CHRD-217ENST00000496527 SMAD5-AS1Q9Y6J3 95 aa17.21■□□□□ 0.35
CHRD-217ENST00000496527 U3KQ87 197 aa17.21■□□□□ 0.35
CHRD-217ENST00000496527 RPS10-NUDT3A0A1W2PQS6 291 aa17.2■□□□□ 0.34
CHRD-217ENST00000496527 IZUMO1RA6ND01 250 aa17.2■□□□□ 0.34
CHRD-217ENST00000496527 IFNA10P01566 189 aa17.2■□□□□ 0.34
CHRD-217ENST00000496527 NPY1RP25929 384 aa17.2■□□□□ 0.34
CHRD-217ENST00000496527 RNASEH2CQ8TDP1 164 aaKnown RBP17.2■□□□□ 0.34
CHRD-217ENST00000496527 FNDC4Q9H6D8 234 aaPredicted RBP17.2■□□□□ 0.34
CHRD-217ENST00000496527 MRPL27Q9P0M9 148 aaKnown RBP17.2■□□□□ 0.34
CHRD-217ENST00000496527 TRAV6A0A075B6T7 132 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 FAM240BA0A1B0GVZ2 78 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 FAM90A26D6RGX4 464 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 UPK1BO75841 260 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 IFNA21P01568 189 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 MLANAQ16655 118 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 C11orf87Q6NUJ2 197 aa17.19■□□□□ 0.34
CHRD-217ENST00000496527 DAZ1Q9NQZ3 744 aaKnown RBP17.19■□□□□ 0.34
CHRD-217ENST00000496527 MED6O75586 246 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 ADAP1O75689 374 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 YIF1AO95070 293 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 TMEM50AO95807 157 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 C8orf88P0DMB2 117 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 CD69Q07108 199 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 ASAH1Q13510 395 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 NUDT15Q9NV35 164 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 TBC1D24Q9ULP9 559 aa17.18■□□□□ 0.34
CHRD-217ENST00000496527 IGHV3OR16-8A0A075B7F1 116 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 K7EMT4 169 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 SCGB2A1O75556 95 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 TGP01266 2768 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 ETFRF1Q6IPR1 90 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 GTSCR1Q86UQ5 136 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 OR52B4Q8NGK2 314 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 OR4X1Q8NH49 305 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 TMEM170AQ8WVE7 144 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 B9D2Q9BPU9 175 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 MLXQ9UH92 298 aa17.17■□□□□ 0.34
CHRD-217ENST00000496527 C15orf62A8K5M9 175 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 CLN5O75503 358 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 SLC25A4P12235 298 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 ATP5IP56385 69 aaPredicted RBP17.16■□□□□ 0.34
CHRD-217ENST00000496527 GUCA2BQ16661 112 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 BTNL8Q6UX41 500 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 MITD1Q8WV92 249 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 MRPL36Q9P0J6 103 aaKnown RBP17.16■□□□□ 0.34
CHRD-217ENST00000496527 SELENOKQ9Y6D0 94 aa17.16■□□□□ 0.34
CHRD-217ENST00000496527 ZNF207O43670 478 aaKnown RBP17.15■□□□□ 0.34
CHRD-217ENST00000496527 H2AFB2P0C5Z0 115 aa17.15■□□□□ 0.34
CHRD-217ENST00000496527 IAPPP10997 89 aa17.15■□□□□ 0.34
CHRD-217ENST00000496527 CIB3Q96Q77 187 aaPredicted RBP17.15■□□□□ 0.34
CHRD-217ENST00000496527 TRAV30A0A087WSZ9 112 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 ZNF785A8K8V0 405 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 SYNGR2O43760 224 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 IFNA4P05014 189 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 PRSS54Q6PEW0 395 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 ZNF600Q6ZNG1 722 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 Q8N1Y9 231 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 WDR89Q96FK6 387 aaPredicted RBP17.14■□□□□ 0.33
CHRD-217ENST00000496527 ZNF414Q96IQ9 312 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 MAGT1Q9H0U3 335 aa17.14■□□□□ 0.33
CHRD-217ENST00000496527 MPTX1A8MV57 137 aa17.13■□□□□ 0.33
CHRD-217ENST00000496527 RND2P52198 227 aa17.13■□□□□ 0.33
CHRD-217ENST00000496527 RBPMS2Q6ZRY4 209 aaKnown RBP17.13■□□□□ 0.33
CHRD-217ENST00000496527 TMEM61Q8N0U2 210 aa17.13■□□□□ 0.33
CHRD-217ENST00000496527 ENKURQ8TC29 256 aa17.13■□□□□ 0.33
CHRD-217ENST00000496527 OR10C1Q96KK4 312 aa17.13■□□□□ 0.33
CHRD-217ENST00000496527 GINS3Q9BRX5 216 aa17.13■□□□□ 0.33
CHRD-217ENST00000496527 RAB11AP62491 216 aa17.12■□□□□ 0.33
CHRD-217ENST00000496527 RPP30P78346 268 aaKnown RBP17.12■□□□□ 0.33
CHRD-217ENST00000496527 IFITM3Q01628 133 aa17.12■□□□□ 0.33
CHRD-217ENST00000496527 TOMM20LQ6UXN7 152 aa17.12■□□□□ 0.33
CHRD-217ENST00000496527 TMEM116Q8NCL8 245 aa17.12■□□□□ 0.33
CHRD-217ENST00000496527 ZNF431Q8TF32 576 aaPredicted RBP17.12■□□□□ 0.33
CHRD-217ENST00000496527 PAIP2BQ9ULR5 123 aaKnown RBP17.12■□□□□ 0.33
CHRD-217ENST00000496527 PUS1Q9Y606 427 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHRD-217ENST00000496527 TRAV14DV4A0A0A6YYC5 116 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 TRAV25A0A0B4J276 109 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 WRBO00258 174 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 SCAF4O95104 1147 aaKnown RBP17.11■□□□□ 0.33
CHRD-217ENST00000496527 ID3Q02535 119 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 SLC16A13Q7RTY0 426 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 OR1S2Q8NGQ3 325 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 SEC22CQ9BRL7 303 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 SMPXQ9UHP9 88 aa17.11■□□□□ 0.33
CHRD-217ENST00000496527 IGHV7-4-1A0A0J9YVY3 117 aa17.1■□□□□ 0.33
CHRD-217ENST00000496527 IGHV4-30-4P0DP06 118 aa17.1■□□□□ 0.33
CHRD-217ENST00000496527 NKX2-1P43699 371 aaPredicted RBP17.1■□□□□ 0.33
CHRD-217ENST00000496527 CD81P60033 236 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms