RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CT45A7P0DMV0 189 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 MGST1P10620 155 aaKnown RBP7.46□□□□□ -1.21
HPS4-217ENST00000496385 CT45A1Q5HYN5 189 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 ATP1A1-AS1Q5TC04 95 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 MIC13Q5XKP0 118 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 C6orf15Q6UXA7 325 aaPredicted RBP7.46□□□□□ -1.21
HPS4-217ENST00000496385 LCNL1Q6ZST4 164 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 TEX45Q8NA69 505 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 NUP35Q8NFH5 326 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 CT45A3Q8NHU0 189 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 LRRC29Q8WV35 223 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 IL1F10Q8WWZ1 152 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 ZDHHC16Q969W1 377 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 ZNF479Q96JC4 524 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 DEPPQ9NTK1 212 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 IDI2-AS1Q9NZ38 188 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 PRSS46E5RG02 174 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 FGF6P10767 208 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 WT1P19544 449 aaPredicted RBP7.46□□□□□ -1.22
HPS4-217ENST00000496385 EIF4EBP1Q13541 118 aaPredicted RBP7.46□□□□□ -1.22
HPS4-217ENST00000496385 LTC4SQ16873 150 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 GDF5OSQ5U4N7 250 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 ZNF788Q6ZQV5 615 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 C1QTNF5Q9BXJ0 243 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 TRAPPC2LQ9UL33 140 aa7.46□□□□□ -1.22
HPS4-217ENST00000496385 BOKQ9UMX3 212 aaPredicted RBP7.46□□□□□ -1.22
HPS4-217ENST00000496385 PIEZO2Q9H5I5 2752 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 TRAV24A0A0B4J272 114 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 RAC3P60763 192 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 ADTRPQ96IZ2 230 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 VGLL1Q99990 258 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 SPRY4Q9C004 299 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 MS4A5Q9H3V2 200 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 PGPEP1Q9NXJ5 209 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 DUSP13Q9UII6 198 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 A0A1B0GX78 115 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 A1L4Q6 167 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 KLRC4-KLRK1H3BQV0 150 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 FBLP22087 321 aaKnown RBP7.45□□□□□ -1.22
HPS4-217ENST00000496385 KIR2DL2P43627 348 aaPredicted RBP7.45□□□□□ -1.22
HPS4-217ENST00000496385 MEF2CQ06413 473 aaPredicted RBP7.45□□□□□ -1.22
HPS4-217ENST00000496385 TEPPQ6URK8 271 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 BLNKQ8WV28 456 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 C12orf49Q9H741 205 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
HPS4-217ENST00000496385 RABAC1Q9UI14 185 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 GTF3C1Q12789 2109 aa7.45□□□□□ -1.22
HPS4-217ENST00000496385 CRYGCP07315 174 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 LIFP15018 202 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 NTF4P34130 210 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 CYB561P49447 251 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 TAS2R45P59539 299 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 HBBP68871 147 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 CEACAM16Q2WEN9 425 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 GCSAMQ8N6F7 178 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 ZNF418Q8TF45 676 aaPredicted RBP7.44□□□□□ -1.22
HPS4-217ENST00000496385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
HPS4-217ENST00000496385 HSPB6O14558 160 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 RBMXL2O75526 392 aaKnown RBP7.44□□□□□ -1.22
HPS4-217ENST00000496385 ZNF32P17041 273 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 UQCRFS1P47985 274 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 CEBPDP49716 269 aaPredicted RBP7.44□□□□□ -1.22
HPS4-217ENST00000496385 PRR20EP86478 221 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 PRR20CP86479 221 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 PRR20DP86480 221 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 PRR20BP86481 221 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 PRR20AP86496 221 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 AESQ08117 197 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 ADAMTSL5Q6ZMM2 481 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 SSX8Q7RTT4 187 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 OR2H1Q9GZK4 316 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 HEYLQ9NQ87 328 aaPredicted RBP7.44□□□□□ -1.22
HPS4-217ENST00000496385 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
HPS4-217ENST00000496385 PTPRQQ9UMZ3 2332 aa7.44□□□□□ -1.22
HPS4-217ENST00000496385 SMAD7O15105 426 aaKnown RBP7.43□□□□□ -1.22
HPS4-217ENST00000496385 PSG5Q15238 335 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 ZNF497Q6ZNH5 498 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 STPG3Q8N7X2 389 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 FADS6Q8N9I5 356 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 ZC2HC1AQ96GY0 325 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 HS3ST6Q96QI5 342 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 METTL7AQ9H8H3 244 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 JPT1Q9UK76 154 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 CACNA1GO43497 2377 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 TEX50A0A1B0GTY4 177 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 NKX2-8O15522 239 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 DNPH1O43598 174 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 AGFG2O95081 481 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 IGHV3-7P01780 117 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 CYC1P08574 325 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 CT83Q5H943 113 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 LINC00173Q6ZV60 143 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 PKIBQ9C010 78 aa7.43□□□□□ -1.22
HPS4-217ENST00000496385 ZNF816Q0VGE8 651 aaPredicted RBP7.42□□□□□ -1.22
HPS4-217ENST00000496385 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms