RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 STX19Q8N4C7 294 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 OR9G4Q8NGQ1 327 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 GRPEL2Q8TAA5 225 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 GHSRQ92847 366 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 MRPL48Q96GC5 212 aaKnown RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 YPEL2Q96QA6 119 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 LITAFQ99732 161 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 SLC29A1Q99808 456 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 AGMATQ9BSE5 352 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 HDHD3Q9BSH5 251 aaPredicted RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 TM2D1Q9BX74 207 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 ZC4H2Q9NQZ6 224 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 PAK1IP1Q9NWT1 392 aaPredicted RBP3.12□□□□□ -1.91
VPS52-222ENST00000495981 SLC2A8Q9NY64 477 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 CLEC2DQ9UHP7 191 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 ING4Q9UNL4 249 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 WASHC3Q9Y3C0 194 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 NUBP2Q9Y5Y2 271 aa3.12□□□□□ -1.91
VPS52-222ENST00000495981 IGHV3OR16-12A0A075B7B8 117 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 TRBV6-6A0A0A6YYG2 114 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 EFCAB10A6NFE3 127 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 HSBP1L1C9JCN9 74 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 MCRIP1C9JLW8 97 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 WRBO00258 174 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 ITGB1BP1O14713 200 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 RAB29O14966 203 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 RBBP9O75884 186 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 OR2A4O95047 310 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 TRGV3P03979 118 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 FUT3P21217 361 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 ZP3P21754 424 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 SYNJ2BPP57105 145 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 RND3P61587 244 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 HLA-DRB3P79483 266 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 ZNF45Q02386 682 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 GPR176Q14439 515 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 PSG5Q15238 335 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 AKIRIN2Q53H80 203 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 OR10K2Q6IF99 312 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 LCN12Q6JVE5 192 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 ZNF343Q6P1L6 599 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 UNQ5815/PRO19632Q6UWF5 114 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 C6orf201Q7Z4U5 140 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 LRRTM1Q86UE6 522 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 PPP1R27Q86WC6 154 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 PDPNQ86YL7 162 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 JAGN1Q8N5M9 183 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 LFNGQ8NES3 379 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 LHFPL5Q8TAF8 219 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 FLYWCH2Q96CP2 140 aaKnown RBP3.11□□□□□ -1.91
VPS52-222ENST00000495981 ABHD14BQ96IU4 210 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 NICN1Q9BSH3 213 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 SELENOIQ9C0D9 397 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 GEMIN7Q9H840 131 aaKnown RBP3.11□□□□□ -1.91
VPS52-222ENST00000495981 EHFQ9NZC4 300 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 METTL1Q9UBP6 276 aaKnown RBP3.11□□□□□ -1.91
VPS52-222ENST00000495981 CKLFQ9UBR5 152 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 ZNF230Q9UIE0 474 aaPredicted RBP3.11□□□□□ -1.91
VPS52-222ENST00000495981 PEX16Q9Y5Y5 336 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 LRP2P98164 4655 aa3.11□□□□□ -1.91
VPS52-222ENST00000495981 IGLV4-3A0A075B6K6 122 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 IGHV3-16A0A0C4DH30 117 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 PNMA8CA0A1B0GUJ8 204 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 LOC100130705A0A1B0GUX0 176 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 SMIM31A0A1B0GVY4 71 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 TMEM14DPA8MWL7 114 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 CD7P09564 240 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 HSMCR30P0CW71 290 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 CD37P11049 281 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 DCKP27707 260 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 HTR2CP28335 458 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 RPL13AP40429 203 aaKnown RBP3.1□□□□□ -1.91
VPS52-222ENST00000495981 TMEM50BP56557 158 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 RPL36AP83881 106 aaKnown RBP3.1□□□□□ -1.91
VPS52-222ENST00000495981 C10orf55Q5SWW7 151 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 RNLSQ5VYX0 342 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 ZFP1Q6P2D0 407 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 GTSCR1Q86UQ5 136 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 Q8N402 240 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 BPIFCQ8NFQ6 507 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 IL1F10Q8WWZ1 152 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 PTX4Q96A99 478 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 GALMQ96C23 342 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 TMEM80Q96HE8 168 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 OR4C12Q96R67 309 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 TMEM59Q9BXS4 323 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 LPAR5Q9H1C0 372 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 AUNIPQ9H7T9 357 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 DIABLOQ9NR28 239 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 ERGIC3Q9Y282 383 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 LSM2Q9Y333 95 aaKnown RBP3.1□□□□□ -1.91
VPS52-222ENST00000495981 RPL36Q9Y3U8 105 aaKnown RBP3.1□□□□□ -1.91
VPS52-222ENST00000495981 ORC6Q9Y5N6 252 aa3.1□□□□□ -1.91
VPS52-222ENST00000495981 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.91
VPS52-222ENST00000495981 FAT4Q6V0I7 4981 aa3.09□□□□□ -1.91
VPS52-222ENST00000495981 TRBV9A0A0B4J1U6 114 aa3.09□□□□□ -1.91
VPS52-222ENST00000495981 A0A1B0GW64 132 aa3.09□□□□□ -1.91
VPS52-222ENST00000495981 TMEM213A2RRL7 107 aa3.09□□□□□ -1.91
VPS52-222ENST00000495981 RPL37AP8A6NKH3 93 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms