RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FAM25GB3EWG6 89 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 SCGB2A1O75556 95 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 CD3DP04234 171 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 ETV6P41212 452 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 TRIM16LQ309B1 348 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 RNASE12Q5GAN4 147 aaKnown RBP16.95■□□□□ 0.3
COL27A1-208ENST00000494780 MZT2AQ6P582 158 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 OR4X1Q8NH49 305 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 C2CD4CQ8TF44 421 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 METTL26Q96S19 204 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 DEFB4AO15263 64 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 OPRK1P41145 380 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 RPL5P46777 297 aaKnown RBP16.94■□□□□ 0.3
COL27A1-208ENST00000494780 TMEM41BQ5BJD5 291 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 CCDC71LQ8N9Z2 235 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 OR52I2Q8NH67 350 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 ZFAND1Q8TCF1 268 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 RRNAD1Q96FB5 475 aaKnown RBP16.94■□□□□ 0.3
COL27A1-208ENST00000494780 GRAMD2BQ96HH9 432 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 FNDC4Q9H6D8 234 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-208ENST00000494780 MRPL36Q9P0J6 103 aaKnown RBP16.94■□□□□ 0.3
COL27A1-208ENST00000494780 COPZ2Q9P299 210 aa16.94■□□□□ 0.3
COL27A1-208ENST00000494780 K7EQG2 157 aa16.93■□□□□ 0.3
COL27A1-208ENST00000494780 B3GALNT1O75752 331 aa16.93■□□□□ 0.3
COL27A1-208ENST00000494780 CRYBB3P26998 211 aa16.93■□□□□ 0.3
COL27A1-208ENST00000494780 AP3S1Q92572 193 aa16.93■□□□□ 0.3
COL27A1-208ENST00000494780 MTFP1Q9UDX5 166 aa16.93■□□□□ 0.3
COL27A1-208ENST00000494780 UCP1P25874 307 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 P2RY1P47900 373 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 PPP5CP53041 499 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 BSXQ3C1V8 233 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 SP6Q3SY56 376 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 TRPT1Q86TN4 253 aaKnown RBP16.92■□□□□ 0.3
COL27A1-208ENST00000494780 STXBP6Q8NFX7 210 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 TERB2Q8NHR7 220 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 TMEM230Q96A57 120 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 NARS2Q96I59 477 aaKnown RBP16.92■□□□□ 0.3
COL27A1-208ENST00000494780 HRH4Q9H3N8 390 aa16.92■□□□□ 0.3
COL27A1-208ENST00000494780 TRAV30A0A087WSZ9 112 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 A0A0G2JRQ6 117 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 C11orf94C9JXX5 98 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 SPP1P10451 314 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 MLANAQ16655 118 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 MORN3Q6PF18 240 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-208ENST00000494780 Q8NAQ8 132 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 RNASE11Q8TAA1 199 aaKnown RBP16.91■□□□□ 0.3
COL27A1-208ENST00000494780 C15orf40Q8WUR7 153 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 EXTL2Q9UBQ6 330 aa16.91■□□□□ 0.3
COL27A1-208ENST00000494780 CD74P04233 296 aa16.9■□□□□ 0.3
COL27A1-208ENST00000494780 GIG44P09565 113 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-208ENST00000494780 SPCS3P61009 180 aa16.9■□□□□ 0.3
COL27A1-208ENST00000494780 AARDQ4LEZ3 155 aa16.9■□□□□ 0.3
COL27A1-208ENST00000494780 FAM219AQ8IW50 185 aa16.9■□□□□ 0.3
COL27A1-208ENST00000494780 OR4D10Q8NGI6 311 aa16.9■□□□□ 0.3
COL27A1-208ENST00000494780 OR13C8Q8NGS7 320 aa16.9■□□□□ 0.3
COL27A1-208ENST00000494780 RPS10-NUDT3A0A1W2PQS6 291 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 IGKV1-17P01599 117 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 ZNF182P17025 639 aaPredicted RBP16.89■□□□□ 0.29
COL27A1-208ENST00000494780 TIGITQ495A1 244 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 TMEM229BQ8NBD8 167 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 OR52E5Q8NH55 327 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 DCANP1Q8TF63 244 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 ABHD1Q96SE0 405 aa16.89■□□□□ 0.29
COL27A1-208ENST00000494780 IGHV4-28A0A0C4DH34 117 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 RAB3DO95716 219 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 ZNF688P0C7X2 276 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 MIFP14174 115 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 HTR2BP41595 481 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 EIF2B2P49770 351 aaKnown RBP16.88■□□□□ 0.29
COL27A1-208ENST00000494780 TAS2R19P59542 299 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 PRR20EP86478 221 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 PRR20CP86479 221 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 PRR20DP86480 221 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 PRR20BP86481 221 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 PRR20AP86496 221 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 SCGB2B2Q4G0G5 96 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 Q6ZRM9 215 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 MARCH1Q8TCQ1 289 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 TMEM222Q9H0R3 208 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-208ENST00000494780 APLNQ9ULZ1 77 aa16.88■□□□□ 0.29
COL27A1-208ENST00000494780 ZNF705EA8MWA4 302 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-208ENST00000494780 CDS2O95674 445 aa16.87■□□□□ 0.29
COL27A1-208ENST00000494780 RBMY1A1P0DJD3 496 aaKnown RBP16.87■□□□□ 0.29
COL27A1-208ENST00000494780 RBMY1CP0DJD4 496 aa16.87■□□□□ 0.29
COL27A1-208ENST00000494780 RBMY1FQ15415 496 aaKnown RBP16.87■□□□□ 0.29
COL27A1-208ENST00000494780 U3KQE9 123 aa16.87■□□□□ 0.29
COL27A1-208ENST00000494780 HELTA6NFD8 242 aa16.86■□□□□ 0.29
COL27A1-208ENST00000494780 KNCNA6PVL3 124 aa16.86■□□□□ 0.29
COL27A1-208ENST00000494780 IGLL5B9A064 214 aa16.86■□□□□ 0.29
COL27A1-208ENST00000494780 STEAP1BQ6NZ63 245 aa16.86■□□□□ 0.29
COL27A1-208ENST00000494780 OR1S2Q8NGQ3 325 aa16.86■□□□□ 0.29
COL27A1-208ENST00000494780 DNAH10Q8IVF4 4471 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 GABARAPO95166 117 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 OR5AC1P0C628 307 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 IGLC1P0CG04 106 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 SLC25A4P12235 298 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 C4BPBP20851 252 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 CTF1Q16619 201 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 C2orf83Q53S99 150 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms