RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TMEM50AO95807 157 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 IFNA17P01571 189 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 OR5AC1P0C628 307 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 HOXA1P49639 335 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-208ENST00000494728 TAS2R19P59542 299 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 AARDQ4LEZ3 155 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 OR4C16Q8NGL9 310 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 TERB2Q8NHR7 220 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 TMEM170AQ8WVE7 144 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 SMIM4Q8WVI0 70 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 TMEM222Q9H0R3 208 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 MS4A6AQ9H2W1 248 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 COPZ2Q9P299 210 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 GABARAPH6UMI1 98 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 IGKV1-17P01599 117 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 MEF2DQ14814 521 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 LEMD1Q68G75 181 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 ZNF600Q6ZNG1 722 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 CCDC71LQ8N9Z2 235 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 GLYATL2Q8WU03 294 aa8.53□□□□□ -1.04
VTI1A-208ENST00000494728 PKHD1P08F94 4074 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 RGS5O15539 181 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 NXPH3O95157 252 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 CDS2O95674 445 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 SNCAP37840 140 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 OPRK1P41145 380 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 NPBWR1P48145 328 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 TIGITQ495A1 244 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 SELENOHQ8IZQ5 122 aaKnown RBP8.52□□□□□ -1.05
VTI1A-208ENST00000494728 DUSP18Q8NEJ0 188 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 ZFAND1Q8TCF1 268 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 TMEM230Q96A57 120 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 GINS3Q9BRX5 216 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 MRPS26Q9BYN8 205 aaKnown RBP8.52□□□□□ -1.05
VTI1A-208ENST00000494728 CSTL1Q9H114 145 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 NAA60Q9H7X0 242 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
VTI1A-208ENST00000494728 NUPR2A6NF83 97 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 DEFB4AO15263 64 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 CLN5O75503 358 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 LY6G6CO95867 125 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 GIG44P09565 113 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-208ENST00000494728 DEFB131AP59861 70 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-208ENST00000494728 GPR141Q7Z602 305 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 CLVS1Q8IUQ0 354 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-208ENST00000494728 OR4X1Q8NH49 305 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 RNASE11Q8TAA1 199 aaKnown RBP8.51□□□□□ -1.05
VTI1A-208ENST00000494728 DYNC2LI1Q8TCX1 351 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 RBPMSQ93062 196 aaKnown RBP8.51□□□□□ -1.05
VTI1A-208ENST00000494728 GPR146Q96CH1 333 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 RRNAD1Q96FB5 475 aaKnown RBP8.51□□□□□ -1.05
VTI1A-208ENST00000494728 PDCD10Q9BUL8 212 aa8.51□□□□□ -1.05
VTI1A-208ENST00000494728 TEX13DA0A0J9YY54 714 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 CRYM-AS1A6NIL9 109 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 MPTX1A8MV57 137 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 CA1P00915 261 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 IGLC1P0CG04 106 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 ATF4P18848 351 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 C4BPBP20851 252 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 CRYBB3P26998 211 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 NANOS2P60321 138 aaKnown RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 SSBP1Q04837 148 aaKnown RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 IL18Q14116 193 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 RBMS2Q15434 407 aaKnown RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 TMEM268Q5VZI3 342 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 PRSS54Q6PEW0 395 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 OR51S1Q8NGJ8 323 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 RABAC1Q9UI14 185 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 GPR132Q9UNW8 380 aa8.5□□□□□ -1.05
VTI1A-208ENST00000494728 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
VTI1A-208ENST00000494728 K7EQG2 157 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 CORTO00230 105 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 DEDDO75618 318 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 ATG12O94817 140 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 AKAIN1P0CW23 69 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 RPL5P46777 297 aaKnown RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 P2RY1P47900 373 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 RND2P52198 227 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 SPCS3P61009 180 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 RPL11P62913 178 aaKnown RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 SUPT4H1P63272 117 aaKnown RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 MRPS10P82664 201 aaKnown RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 SURF2Q15527 256 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 SLC24A4Q8NFF2 622 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 STXBP6Q8NFX7 210 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 OR11H2Q8NH07 326 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 C15orf40Q8WUR7 153 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 GATAD1Q8WUU5 269 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 PHLDA1Q8WV24 401 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 DIRAS2Q96HU8 199 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 RARRES2Q99969 163 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 C6orf62Q9GZU0 229 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 C11orf68Q9H3H3 251 aaKnown RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 ENY2Q9NPA8 101 aa8.49□□□□□ -1.05
VTI1A-208ENST00000494728 CCDC59Q9P031 241 aaKnown RBP8.49□□□□□ -1.05
VTI1A-208ENST00000494728 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms