RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FAM110AQ9BQ89 295 aa24.8■■□□□ 1.56
CBX4-203ENST00000494546 EDA2RQ9HAV5 297 aa24.8■■□□□ 1.56
CBX4-203ENST00000494546 HEYLQ9NQ87 328 aaPredicted RBP24.8■■□□□ 1.56
CBX4-203ENST00000494546 UBQLN2Q9UHD9 624 aa24.8■■□□□ 1.56
CBX4-203ENST00000494546 ZNF79Q15937 498 aa24.79■■□□□ 1.56
CBX4-203ENST00000494546 RHPN1-AS1Q9BWJ2 59 aa24.79■■□□□ 1.56
CBX4-203ENST00000494546 TRAV14DV4A0A0A6YYC5 116 aa24.78■■□□□ 1.56
CBX4-203ENST00000494546 CEBPZOSA8MTT3 80 aa24.78■■□□□ 1.56
CBX4-203ENST00000494546 NXPH3O95157 252 aa24.78■■□□□ 1.56
CBX4-203ENST00000494546 LYL1P12980 280 aa24.78■■□□□ 1.56
CBX4-203ENST00000494546 BSXQ3C1V8 233 aa24.78■■□□□ 1.56
CBX4-203ENST00000494546 RNF2Q99496 336 aa24.78■■□□□ 1.56
CBX4-203ENST00000494546 FNDC4Q9H6D8 234 aaPredicted RBP24.78■■□□□ 1.56
CBX4-203ENST00000494546 CHEK1O14757 476 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 TMEM50AO95807 157 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 HTR2BP41595 481 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 SUPT4H1P63272 117 aaKnown RBP24.77■■□□□ 1.56
CBX4-203ENST00000494546 MLANAQ16655 118 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 CASC10Q5T4H9 136 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 TOMM20LQ6UXN7 152 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 CCDC190Q86UF4 302 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 GGTLC1Q9BX51 225 aa24.77■■□□□ 1.56
CBX4-203ENST00000494546 IGHV3OR16-13A0A075B7E8 117 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 IGHV3-74A0A0B4J1X5 117 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 ZNF701M0R085 212 aaPredicted RBP24.76■■□□□ 1.55
CBX4-203ENST00000494546 SULT1A3P0DMM9 295 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 SULT1A4P0DMN0 295 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 ZNF600Q6ZNG1 722 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 TMED4Q7Z7H5 227 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 GINS3Q9BRX5 216 aa24.76■■□□□ 1.55
CBX4-203ENST00000494546 MRPL36Q9P0J6 103 aaKnown RBP24.76■■□□□ 1.55
CBX4-203ENST00000494546 KMT2CQ8NEZ4 4911 aaKnown RBP24.76■■□□□ 1.55
CBX4-203ENST00000494546 LOC102724200A0A096LPH7 203 aaPredicted RBP24.75■■□□□ 1.55
CBX4-203ENST00000494546 OR4C46A6NHA9 309 aa24.75■■□□□ 1.55
CBX4-203ENST00000494546 ANXA3P12429 323 aa24.75■■□□□ 1.55
CBX4-203ENST00000494546 PUS1Q9Y606 427 aaKnown RBP eCLIP24.75■■□□□ 1.55
CBX4-203ENST00000494546 LYZL2Q7Z4W2 148 aa24.74■■□□□ 1.55
CBX4-203ENST00000494546 A0A0B4J2A0 478 aa24.73■■□□□ 1.55
CBX4-203ENST00000494546 CLN5O75503 358 aa24.73■■□□□ 1.55
CBX4-203ENST00000494546 LGI3Q8N145 548 aa24.73■■□□□ 1.55
CBX4-203ENST00000494546 SLC24A4Q8NFF2 622 aa24.73■■□□□ 1.55
CBX4-203ENST00000494546 OR4X1Q8NH49 305 aa24.73■■□□□ 1.55
CBX4-203ENST00000494546 SHPKQ9UHJ6 478 aa24.73■■□□□ 1.55
CBX4-203ENST00000494546 SRPXP78539 464 aa24.72■■□□□ 1.55
CBX4-203ENST00000494546 ODF3L2Q3SX64 289 aa24.72■■□□□ 1.55
CBX4-203ENST00000494546 C2orf83Q53S99 150 aa24.72■■□□□ 1.55
CBX4-203ENST00000494546 SPANXN2Q5MJ10 180 aa24.72■■□□□ 1.55
CBX4-203ENST00000494546 ZFAND3Q9H8U3 227 aa24.72■■□□□ 1.55
CBX4-203ENST00000494546 CACFD1Q9UGQ2 172 aa24.72■■□□□ 1.55
CBX4-203ENST00000494546 IGKV3-7A0A075B6H7 116 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 A0A1B0GU03 582 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 RPS10-NUDT3A0A1W2PQS6 291 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 CCR6P51684 374 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 NMSQ5H8A3 153 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 ZFAND6Q6FIF0 208 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 NBEAL2Q6ZNJ1 2754 aa24.71■■□□□ 1.55
CBX4-203ENST00000494546 SCGB2A1O75556 95 aa24.7■■□□□ 1.54
CBX4-203ENST00000494546 BMI1P35226 326 aa24.7■■□□□ 1.54
CBX4-203ENST00000494546 TFPI2P48307 235 aa24.7■■□□□ 1.54
CBX4-203ENST00000494546 SMCO1Q147U7 214 aa24.7■■□□□ 1.54
CBX4-203ENST00000494546 ST8SIA2Q92186 375 aa24.7■■□□□ 1.54
CBX4-203ENST00000494546 TMEM128Q5BJH2 165 aa24.69■■□□□ 1.54
CBX4-203ENST00000494546 IGHV3-66A0A0C4DH42 116 aa24.68■■□□□ 1.54
CBX4-203ENST00000494546 APOHP02749 345 aaPredicted RBP24.68■■□□□ 1.54
CBX4-203ENST00000494546 TNFRSF9Q07011 255 aa24.68■■□□□ 1.54
CBX4-203ENST00000494546 TCF24Q7RTU0 167 aa24.68■■□□□ 1.54
CBX4-203ENST00000494546 RNASEH2CQ8TDP1 164 aaKnown RBP24.68■■□□□ 1.54
CBX4-203ENST00000494546 DEDD2Q8WXF8 326 aa24.68■■□□□ 1.54
CBX4-203ENST00000494546 SRRQ9GZT4 340 aa24.68■■□□□ 1.54
CBX4-203ENST00000494546 VAMP1P23763 118 aa24.67■■□□□ 1.54
CBX4-203ENST00000494546 NPY1RP25929 384 aa24.67■■□□□ 1.54
CBX4-203ENST00000494546 TIGITQ495A1 244 aa24.67■■□□□ 1.54
CBX4-203ENST00000494546 GBGT1Q8N5D6 347 aa24.67■■□□□ 1.54
CBX4-203ENST00000494546 TMEM170AQ8WVE7 144 aa24.67■■□□□ 1.54
CBX4-203ENST00000494546 SLC25A21Q9BQT8 299 aaPredicted RBP24.67■■□□□ 1.54
CBX4-203ENST00000494546 RND2P52198 227 aa24.66■■□□□ 1.54
CBX4-203ENST00000494546 FAM90A2PQ658T7 463 aa24.66■■□□□ 1.54
CBX4-203ENST00000494546 VSIRQ9H7M9 311 aa24.66■■□□□ 1.54
CBX4-203ENST00000494546 HSPB7Q9UBY9 170 aa24.66■■□□□ 1.54
CBX4-203ENST00000494546 TRAV30A0A087WSZ9 112 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 IFNA10P01566 189 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 IGKV1-17P01599 117 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 SLC25A4P12235 298 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 PRSS54Q6PEW0 395 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 NOXA1Q86UR1 476 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 LILRB2Q8N423 598 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 OR1S1Q8NH92 325 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 DTD1Q8TEA8 209 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 RBKSQ9H477 322 aa24.65■■□□□ 1.54
CBX4-203ENST00000494546 NPPCP23582 126 aa24.64■■□□□ 1.54
CBX4-203ENST00000494546 INPP1P49441 399 aa24.64■■□□□ 1.54
CBX4-203ENST00000494546 DNAH7Q8WXX0 4024 aa24.64■■□□□ 1.53
CBX4-203ENST00000494546 PIGBOS1A0A0B4J2F0 54 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 CD5P06127 495 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 APOC4P55056 127 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 RPL11P62913 178 aaKnown RBP24.63■■□□□ 1.53
CBX4-203ENST00000494546 PAFAH1B2P68402 229 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 ETFRF1Q6IPR1 90 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 WFDC3Q8IUB2 231 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 APRG1Q8IVJ8 170 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms