RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 HNF4GQ14541 408 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 GUK1Q16774 197 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 ACOT6Q3I5F7 207 aaPredicted RBP5.35□□□□□ -1.55
MSH5-217ENST00000494458 AKIRIN2Q53H80 203 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 KHDC3LQ587J8 217 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 FFAR4Q5NUL3 377 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 MIC13Q5XKP0 118 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 RUSC1-AS1Q66K80 236 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 SLC25A24Q6NUK1 477 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 C16orf82Q7Z2V1 217 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 LINC00528Q8N1L1 170 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 ZNF709Q8N972 641 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 OR10G9Q8NGN4 311 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 OR10G7Q8NGN6 311 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 OR4X1Q8NH49 305 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 OR2T6Q8NHC8 308 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 SFT2D1Q8WV19 159 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 ARPC1AQ92747 370 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 RAB24Q969Q5 203 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 SLC35E1Q96K37 410 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 TRGV9Q99603 122 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 SEC11CQ9BY50 192 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 WNT10AQ9GZT5 417 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 SLC39A9Q9NUM3 307 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 MRPL36Q9P0J6 103 aaKnown RBP5.35□□□□□ -1.55
MSH5-217ENST00000494458 PXMP4Q9Y6I8 212 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
MSH5-217ENST00000494458 DOPEY2Q9Y3R5 2298 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 TRAV40A0A0B4J280 105 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 TCRBV4S1A1TA0A5B7 111 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 RBFOX3A6NFN3 312 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 F8W735 103 aaPredicted RBP5.34□□□□□ -1.55
MSH5-217ENST00000494458 HSPB1P04792 205 aaKnown RBP5.34□□□□□ -1.55
MSH5-217ENST00000494458 IGF1P05019 195 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 FBP1P09467 338 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 OR5G3P0C626 314 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 TAGLN2P37802 199 aaKnown RBP5.34□□□□□ -1.55
MSH5-217ENST00000494458 B2MP61769 119 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 ZNF616Q08AN1 781 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 HES1Q14469 280 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 ICAM4Q14773 271 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 PEA15Q15121 130 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 BRD3OSQ6XYD6 125 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 STPG3Q8N7X2 389 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 GATAD1Q8WUU5 269 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 SSMEM1Q8WWF3 244 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 TMEM37Q8WXS4 190 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 NPIPB3Q92617 1050 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 ATP6V0BQ99437 205 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 SSX3Q99909 188 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 HSPB9Q9BQS6 159 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 SLC25A33Q9BSK2 321 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 ACTR3CQ9C0K3 210 aaPredicted RBP5.34□□□□□ -1.55
MSH5-217ENST00000494458 UNC79Q9P2D8 2635 aa5.34□□□□□ -1.55
MSH5-217ENST00000494458 AKAP9Q99996 3911 aa5.34□□□□□ -1.56
MSH5-217ENST00000494458 CR1P17927 2039 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 NAV3Q8IVL0 2385 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 LOC102723971A0A1B0GUV8 181 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 MAP1LC3B2A6NCE7 125 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 NCBP2LA6PVI3 153 aaKnown RBP5.33□□□□□ -1.56
MSH5-217ENST00000494458 M0QZK8 103 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 CLN5O75503 358 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 CNIH1O95406 144 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 MT-CO2P00403 227 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 TGFAP01135 160 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 IGKV1-17P01599 117 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 IGHG2P01859 326 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 REG1AP05451 166 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
MSH5-217ENST00000494458 IGLC1P0CG04 106 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 OR10J1P30954 320 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 IER3P46695 156 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 PSMB3P49720 205 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 KRTAP1-1Q07627 177 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 PLGLAQ15195 96 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 GCSAMLQ5JQS6 135 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 CYB5R2Q6BCY4 276 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 HIST2H2BCQ6DN03 193 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 PATE2Q6UY27 113 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 CYP2G1PQ6ZSU1 146 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 SLC35E3Q7Z769 313 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 FAM110DQ8TAY7 271 aaPredicted RBP5.33□□□□□ -1.56
MSH5-217ENST00000494458 VN1R17PQ8TDU5 208 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 ZNF414Q96IQ9 312 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 FAM167A-AS1Q96KT0 104 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 Q96MF0 132 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 RNF2Q99496 336 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 TXN2Q99757 166 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 RARRES2Q99969 163 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 RASL11BQ9BPW5 248 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 TXNDC17Q9BRA2 123 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 PBDC1Q9BVG4 233 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 MAP1LC3BQ9GZQ8 125 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 SLC35B3Q9H1N7 401 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 SEPSECSQ9HD40 501 aaKnown RBP5.33□□□□□ -1.56
MSH5-217ENST00000494458 MOB4Q9Y3A3 225 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 SOX21Q9Y651 276 aaPredicted RBP5.33□□□□□ -1.56
MSH5-217ENST00000494458 ARL2-SNX15V9GYD0 113 aa5.33□□□□□ -1.56
MSH5-217ENST00000494458 MAP1AP78559 2803 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms