RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.65
ATG4B-224ENST00000494132 TMEM170AQ8WVE7 144 aa11.02□□□□□ -0.65
ATG4B-224ENST00000494132 TXN2Q99757 166 aa11.02□□□□□ -0.65
ATG4B-224ENST00000494132 ZMAT4Q9H898 229 aa11.02□□□□□ -0.65
ATG4B-224ENST00000494132 SRD5A3Q9H8P0 318 aa11.02□□□□□ -0.65
ATG4B-224ENST00000494132 GAR1Q9NY12 217 aaKnown RBP11.02□□□□□ -0.65
ATG4B-224ENST00000494132 SHPKQ9UHJ6 478 aa11.02□□□□□ -0.65
ATG4B-224ENST00000494132 CORTO00230 105 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 NPBWR1P48145 328 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 TMEM128Q5BJH2 165 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 PVRIGQ6DKI7 326 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 SLC24A4Q8NFF2 622 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 SLC25A21Q9BQT8 299 aaPredicted RBP11.01□□□□□ -0.65
ATG4B-224ENST00000494132 TM2D3Q9BRN9 247 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 RETNQ9HD89 108 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 UBQLN2Q9UHD9 624 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 FLVCR2Q9UPI3 526 aa11.01□□□□□ -0.65
ATG4B-224ENST00000494132 IGKV3-7A0A075B6H7 116 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 RBMY1BA6NDE4 496 aaKnown RBP11□□□□□ -0.65
ATG4B-224ENST00000494132 RBMY1EA6NEQ0 496 aaKnown RBP11□□□□□ -0.65
ATG4B-224ENST00000494132 TMEM50AO95807 157 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 RBMY1DP0C7P1 496 aaKnown RBP11□□□□□ -0.65
ATG4B-224ENST00000494132 HTR2BP41595 481 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 SMCO1Q147U7 214 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 RBMS2Q15434 407 aaKnown RBP11□□□□□ -0.65
ATG4B-224ENST00000494132 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 CENPSQ8N2Z9 138 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 OR1S1Q8NH92 325 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 RNF2Q99496 336 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 RBKSQ9H477 322 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 PUS1Q9Y606 427 aaKnown RBP eCLIP11□□□□□ -0.65
ATG4B-224ENST00000494132 STAB2Q8WWQ8 2551 aa11□□□□□ -0.65
ATG4B-224ENST00000494132 IGHV3-66A0A0C4DH42 116 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 A0A1B0GU03 582 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 C15orf62A8K5M9 175 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 K7EMT4 169 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 SFT2D2O95562 160 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 IL7P13232 177 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 SRPXP78539 464 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 TIGITQ495A1 244 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 TMEM116Q8NCL8 245 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 DEDD2Q8WXF8 326 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 FAM110AQ9BQ89 295 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 HIPK2Q9H2X6 1198 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 NDUFA13Q9P0J0 144 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 SMPXQ9UHP9 88 aa10.99□□□□□ -0.65
ATG4B-224ENST00000494132 TRAV25A0A0B4J276 109 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 CHEK1O14757 476 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 CLN5O75503 358 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 IFNA10P01566 189 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
ATG4B-224ENST00000494132 HOXB5P09067 269 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 NPY1RP25929 384 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 BTCP35070 178 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 TFPI2P48307 235 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 RND2P52198 227 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 C2orf83Q53S99 150 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 ZNF600Q6ZNG1 722 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 DTD1Q8TEA8 209 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 OR10C1Q96KK4 312 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 CITED4Q96RK1 184 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 ZFAND3Q9H8U3 227 aa10.98□□□□□ -0.65
ATG4B-224ENST00000494132 TRAV14DV4A0A0A6YYC5 116 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 TSPAN4O14817 238 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 NDUFB6O95139 128 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 IAPPP10997 89 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 LAMTOR1Q6IAA8 161 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 PRSS54Q6PEW0 395 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 LINC00322Q6ZN03 302 aaPredicted RBP10.97□□□□□ -0.65
ATG4B-224ENST00000494132 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 ST8SIA2Q92186 375 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 SPAG8Q99932 426 aaPredicted RBP10.97□□□□□ -0.65
ATG4B-224ENST00000494132 SPATA25Q9BR10 227 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 GINS3Q9BRX5 216 aa10.97□□□□□ -0.65
ATG4B-224ENST00000494132 RPS10-NUDT3A0A1W2PQS6 291 aa10.96□□□□□ -0.65
ATG4B-224ENST00000494132 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
ATG4B-224ENST00000494132 ANXA7P20073 488 aaKnown RBP10.96□□□□□ -0.65
ATG4B-224ENST00000494132 LILRB2Q8N423 598 aa10.96□□□□□ -0.65
ATG4B-224ENST00000494132 GBGT1Q8N5D6 347 aa10.96□□□□□ -0.65
ATG4B-224ENST00000494132 ACY3Q96HD9 319 aa10.96□□□□□ -0.65
ATG4B-224ENST00000494132 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.65
ATG4B-224ENST00000494132 AGRNO00468 2067 aa10.96□□□□□ -0.66
ATG4B-224ENST00000494132 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 C9orf170A2RU37 121 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 PITX3O75364 302 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 ADAP1O75689 374 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 IGKV1-17P01599 117 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 ZNF124Q15973 351 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 WFDC3Q8IUB2 231 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 LRTM2Q8N967 370 aa10.95□□□□□ -0.66
ATG4B-224ENST00000494132 RNASEH2CQ8TDP1 164 aaKnown RBP10.95□□□□□ -0.66
ATG4B-224ENST00000494132 PAIP2BQ9ULR5 123 aaKnown RBP10.95□□□□□ -0.66
ATG4B-224ENST00000494132 OR4C46A6NHA9 309 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms