RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SPANXN5Q5MJ07 72 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 LCE4AQ5TA78 99 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 C11orf87Q6NUJ2 197 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 PRSS54Q6PEW0 395 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 TCTE3Q8IZS6 198 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 SLC24A4Q8NFF2 622 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 ST6GAL2Q96JF0 529 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 TMEM68Q96MH6 324 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 NOL4LQ96MY1 436 aaPredicted RBP9.46□□□□□ -0.9
UPF3A-210ENST00000493727 GPR61Q9BZJ8 451 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 ZC4H2Q9NQZ6 224 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 OR5AC2Q9NZP5 309 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 ZNF580Q9UK33 172 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 CYB5BO43169 146 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 IGF1P05019 195 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 OR8U8P0C7N1 319 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
UPF3A-210ENST00000493727 NPY1RP25929 384 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 HTR2BP41595 481 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 RAB11AP62491 216 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 SLC35B1P78383 322 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 NOXA1Q86UR1 476 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 STPG2Q8N412 459 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 OR5T1Q8NG75 326 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 ZNF355PQ9NSJ1 428 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
UPF3A-210ENST00000493727 U3KQ87 197 aa9.45□□□□□ -0.9
UPF3A-210ENST00000493727 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 TRAV14DV4A0A0A6YYC5 116 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 INS-IGF2F8WCM5 200 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 G3V318 75 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 H0YIZ8 118 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 TSC22D2O75157 780 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 CRIP2P52943 208 aaPredicted RBP9.44□□□□□ -0.9
UPF3A-210ENST00000493727 TAS2R30P59541 319 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 AKIRIN2Q53H80 203 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 Q5BKY6 102 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 ASPHD1Q5U4P2 390 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 SMIM8Q96KF7 97 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 NEURL2Q9BR09 285 aa9.44□□□□□ -0.9
UPF3A-210ENST00000493727 PSMB11A5LHX3 300 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 FAM24AA6NFZ4 105 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 IFNA4P05014 189 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 SLC25A4P12235 298 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 IGLL1P15814 213 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 CTRB1P17538 263 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 P2RY1P47900 373 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 CD300CQ08708 224 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 ZFP69Q49AA0 526 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 CTRB2Q6GPI1 263 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 SLC25A24Q6NUK1 477 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 STX12Q86Y82 276 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 INO80EQ8NBZ0 244 aaPredicted RBP9.43□□□□□ -0.9
UPF3A-210ENST00000493727 OR1L6Q8NGR2 347 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 OR4C12Q96R67 309 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 P2RX4Q99571 388 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 SLC25A31Q9H0C2 315 aa9.43□□□□□ -0.9
UPF3A-210ENST00000493727 LYRM2Q9NU23 88 aaPredicted RBP9.43□□□□□ -0.9
UPF3A-210ENST00000493727 F11RQ9Y624 299 aaKnown RBP9.43□□□□□ -0.9
UPF3A-210ENST00000493727 EPPK1P58107 5090 aaKnown RBP9.43□□□□□ -0.9
UPF3A-210ENST00000493727 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
UPF3A-210ENST00000493727 TNCP24821 2201 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 K7EIL1 84 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 TMEM50AO95807 157 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 PRH1P02810 166 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 CRYGCP07315 174 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 METTL15P1P0C7V9 234 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 RNASE2P10153 161 aaKnown RBP9.42□□□□□ -0.9
UPF3A-210ENST00000493727 PAX9P55771 341 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
UPF3A-210ENST00000493727 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 ZNF546Q86UE3 836 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 ZNF114Q8NC26 417 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 OR1P1Q8NH06 330 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 DPF1Q92782 380 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 PINX1Q96BK5 328 aaKnown RBP9.42□□□□□ -0.9
UPF3A-210ENST00000493727 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
UPF3A-210ENST00000493727 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 C15orf62A8K5M9 175 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 G3V3Q6 166 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 CORTO00230 105 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 ARPC5O15511 151 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 SCAF4O95104 1147 aaKnown RBP9.41□□□□□ -0.9
UPF3A-210ENST00000493727 C1QBP02746 253 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 LYL1P12980 280 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 HIST1H1BP16401 226 aaKnown RBP9.41□□□□□ -0.9
UPF3A-210ENST00000493727 RPL12P30050 165 aaKnown RBP9.41□□□□□ -0.9
UPF3A-210ENST00000493727 OPRK1P41145 380 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 C2orf83Q53S99 150 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 COMMD1Q8N668 190 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms