RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MMDQ15546 238 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 C16orf82Q7Z2V1 217 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 VMO1Q7Z5L0 202 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 TMEM37Q8WXS4 190 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 OR5B12Q96R08 314 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 TGIF2-C20orf24A0A0A6YYL0 155 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 A0A1W2PRE2 83 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 COX7A2P2O60397 106 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 FOXH1O75593 365 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 REG1AP05451 166 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 GATA2P23769 480 aaPredicted RBP8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 OR2T10Q8NGZ9 312 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 FAM210BQ96KR6 192 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 SIRPDQ9H106 197 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 TBL2Q9Y4P3 447 aaKnown RBP8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 IGHV2-70DA0A0C4DH43 119 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 C9JCJ5 164 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 MFAP2P55001 183 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 SSBP2P81877 361 aaPredicted RBP8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 KLRD1Q13241 179 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 SSX3Q99909 188 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
PHACTR4-204ENST00000493669 PKD1L2Q7Z442 2459 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 SPTBN1Q01082 2364 aaKnown RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 SCO2A0A1W2PP80 73 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 OR7C2O60412 319 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 PFN1P07737 140 aaKnown RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 HOXB4P17483 251 aaPredicted RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 ZFP36P26651 326 aaKnown RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 SRP14P37108 136 aaKnown RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 C10orf113Q5VZT2 155 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 ZNF503Q96F45 646 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 HILPDAQ9Y5L2 63 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 SMG1Q96Q15 3661 aaKnown RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 UBE2CO00762 179 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 NDUFS7O75251 213 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 EBI3Q14213 229 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 STXBP6Q8NFX7 210 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 EAF1Q96JC9 268 aaPredicted RBP8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 FAM167A-AS1Q96KT0 104 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 IMMP2LQ96T52 175 aa8.61□□□□□ -1.03
PHACTR4-204ENST00000493669 LGALS4P56470 323 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 PLP1P60201 277 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 KIAA0141Q14154 515 aaPredicted RBP8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 LHFPL4Q7Z7J7 247 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 OR4X1Q8NH49 305 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 IGFBPL1Q8WX77 278 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 SLC25A2Q9BXI2 301 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 GALR1P47211 349 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 C5orf64Q2M2E5 130 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 NAV3Q8IVL0 2385 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 AP4M1O00189 453 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 FCN1O00602 326 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 CNIH1O95406 144 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 PDLIM4P50479 330 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 LMO4P61968 165 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 ZNF90Q03938 601 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 Q8N6K4 173 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 PERPQ96FX8 193 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 DERL1Q9BUN8 251 aa8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 POLR3KQ9Y2Y1 108 aaPredicted RBP8.6□□□□□ -1.03
PHACTR4-204ENST00000493669 HRNRQ86YZ3 2850 aaPredicted RBP8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 UBE2E1P51965 193 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 KCNIP4Q6PIL6 250 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 SRD5A3Q9H8P0 318 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 ZNF355PQ9NSJ1 428 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 I3L2K1 104 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 PATE2Q6UY27 113 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 OR5AU1Q8NGC0 362 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 BPESC1Q9GZL8 116 aa8.59□□□□□ -1.03
PHACTR4-204ENST00000493669 TRBV20OR9-2A0A075B6H5 130 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 MDFIC2A0A1B0GVS7 189 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 GGCTO75223 188 aaKnown RBP8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 TOX4O94842 621 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 FABP1P07148 127 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 LCN2P80188 198 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 PAXXQ9BUH6 204 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 WNT10AQ9GZT5 417 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 LPAR2Q9HBW0 351 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 HES1Q14469 280 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 FXYD3Q14802 87 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 ZNF562Q6V9R5 426 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 SFRP2Q96HF1 295 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 DMRT1Q9Y5R6 373 aa8.58□□□□□ -1.04
PHACTR4-204ENST00000493669 NPIPB5A8MRT5 1133 aa8.57□□□□□ -1.04
PHACTR4-204ENST00000493669 TYMSP04818 313 aa8.57□□□□□ -1.04
PHACTR4-204ENST00000493669 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms