RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 IGSF23A1L1A6 192 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 OR2T8A6NH00 312 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 ARL3P36405 182 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 MFAP4P55083 255 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 ZNF502Q8TBZ5 544 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 VN1R17PQ8TDU5 208 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 DPF1Q92782 380 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 SLC35E1Q96K37 410 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
HPS4-216ENST00000493455 LYRM2Q9NU23 88 aaPredicted RBP12.18□□□□□ -0.46
HPS4-216ENST00000493455 MRPL36Q9P0J6 103 aaKnown RBP12.18□□□□□ -0.46
HPS4-216ENST00000493455 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
HPS4-216ENST00000493455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
HPS4-216ENST00000493455 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 I3L521 148 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 GNG7O60262 68 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 PF4P02776 101 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 CLEC3BP05452 202 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 RND2P52198 227 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
HPS4-216ENST00000493455 CD69Q07108 199 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 FGL1Q08830 312 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 KLK9Q2XQG4 91 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 TMEM14EPQ6UXP3 125 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 ACOT7LQ6ZUV0 252 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 STX12Q86Y82 276 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 OR10P1Q8NGE3 313 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 OR1N2Q8NGR9 330 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 RAX2Q96IS3 184 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 RNF126Q9BV68 326 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 KLK9Q9UKQ9 250 aa12.17□□□□□ -0.46
HPS4-216ENST00000493455 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 IGHV3-35A0A0C4DH35 117 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 TSPAN15O95858 294 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 P2RY1P47900 373 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 SLURP1P55000 103 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 AKR1C1Q04828 323 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 KRTAP21-3Q3LHN1 58 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 TMEM252Q8N6L7 170 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 SLC25A31Q9H0C2 315 aa12.16□□□□□ -0.46
HPS4-216ENST00000493455 LINC01619G3V211 115 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 M0QZ24 198 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 CCL24O00175 119 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
HPS4-216ENST00000493455 SLC25A4P12235 298 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 NPBWR1P48145 328 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 SULT1A1P50225 295 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 EWSR1Q01844 656 aaKnown RBP eCLIP12.15□□□□□ -0.46
HPS4-216ENST00000493455 SLC38A11Q08AI6 406 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 ZNF616Q08AN1 781 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 RPEL1Q2QD12 228 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 AKAP14Q86UN6 197 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 HAPLN4Q86UW8 402 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 OR4F17Q8NGA8 305 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 NPIPB3Q92617 1050 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 OR4F4Q96R69 305 aa12.15□□□□□ -0.46
HPS4-216ENST00000493455 WNK1Q9H4A3 2382 aa12.14□□□□□ -0.47
HPS4-216ENST00000493455 PMS2P5A8MQ11 134 aa12.14□□□□□ -0.47
HPS4-216ENST00000493455 BMPR1BO00238 502 aa12.14□□□□□ -0.47
HPS4-216ENST00000493455 TGOLN2O43493 480 aa12.14□□□□□ -0.47
HPS4-216ENST00000493455 RPL12P30050 165 aaKnown RBP12.14□□□□□ -0.47
HPS4-216ENST00000493455 NUP62P37198 522 aaPredicted RBP12.14□□□□□ -0.47
HPS4-216ENST00000493455 NHLH2Q02577 135 aa12.14□□□□□ -0.47
HPS4-216ENST00000493455 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
HPS4-216ENST00000493455 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 F8W735 103 aaPredicted RBP12.13□□□□□ -0.47
HPS4-216ENST00000493455 NUPL2O15504 423 aaKnown RBP12.13□□□□□ -0.47
HPS4-216ENST00000493455 CLN5O75503 358 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 OR2C1O95371 312 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 GPX4P36969 197 aaPredicted RBP12.13□□□□□ -0.47
HPS4-216ENST00000493455 AP2S1P53680 142 aaPredicted RBP12.13□□□□□ -0.47
HPS4-216ENST00000493455 HBG1P69891 147 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 HBG2P69892 147 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 RUNX1Q01196 453 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 GAMTQ14353 236 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 TIGITQ495A1 244 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 BSCL2Q96G97 398 aaPredicted RBP12.13□□□□□ -0.47
HPS4-216ENST00000493455 ST6GAL2Q96JF0 529 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 CHRDL1Q9BU40 450 aa12.13□□□□□ -0.47
HPS4-216ENST00000493455 IGHV3OR16-8A0A075B7F1 116 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 ZFP92A6NM28 416 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 GGCTO75223 188 aaKnown RBP12.12□□□□□ -0.47
HPS4-216ENST00000493455 SCGB2A1O75556 95 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 LYL1P12980 280 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 OR10J1P30954 320 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 HOXD3P31249 432 aaPredicted RBP12.12□□□□□ -0.47
HPS4-216ENST00000493455 MYCNOSP40205 109 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 DLK1P80370 383 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 CLINT1Q14677 625 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 ZNF546Q86UE3 836 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 OR5C1Q8NGR4 320 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 OR4X1Q8NH49 305 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms