RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CDS2O95674 445 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 IGHV3-48P01763 117 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 OPRK1P41145 380 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 HTR2BP41595 481 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 HOXA1P49639 335 aaPredicted RBP9.19□□□□□ -0.94
COL6A1-205ENST00000492851 EIF2B2P49770 351 aaKnown RBP9.19□□□□□ -0.94
COL6A1-205ENST00000492851 PMS2P11Q13670 270 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 RNASE12Q5GAN4 147 aaKnown RBP9.19□□□□□ -0.94
COL6A1-205ENST00000492851 NOXA1Q86UR1 476 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 OR13C8Q8NGS7 320 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 OR4X1Q8NH49 305 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 LINC00476Q8WZB0 136 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 TMEM230Q96A57 120 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 GRAMD2BQ96HH9 432 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 METTL26Q96S19 204 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 RARRES2Q99969 163 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 MFFQ9GZY8 342 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 PIGBOS1A0A0B4J2F0 54 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 TEX13DA0A0J9YY54 714 aaPredicted RBP9.18□□□□□ -0.94
COL6A1-205ENST00000492851 LY6G6CO95867 125 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 RNASE2P10153 161 aaKnown RBP9.18□□□□□ -0.94
COL6A1-205ENST00000492851 PPP5CP53041 499 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 IZUMO4Q1ZYL8 232 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 SP6Q3SY56 376 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 AARDQ4LEZ3 155 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 SPINK9Q5DT21 86 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 GPR141Q7Z602 305 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 GBGT1Q8N5D6 347 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 MARCH1Q8TCQ1 289 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 ST8SIA2Q92186 375 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 SCGB3A2Q96PL1 93 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 TMEM222Q9H0R3 208 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 KCNIP3Q9Y2W7 256 aa9.18□□□□□ -0.94
COL6A1-205ENST00000492851 IGHV3OR16-13A0A075B7E8 117 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 IGHV3-74A0A0B4J1X5 117 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 SLC25A4P12235 298 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
COL6A1-205ENST00000492851 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 RNASEH2CQ8TDP1 164 aaKnown RBP9.17□□□□□ -0.94
COL6A1-205ENST00000492851 Q8WTZ3 238 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 RBPMSQ93062 196 aaKnown RBP9.17□□□□□ -0.94
COL6A1-205ENST00000492851 PRRT1Q99946 306 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 MRPS26Q9BYN8 205 aaKnown RBP9.17□□□□□ -0.94
COL6A1-205ENST00000492851 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
COL6A1-205ENST00000492851 HEYLQ9NQ87 328 aaPredicted RBP9.17□□□□□ -0.94
COL6A1-205ENST00000492851 A0A1B0GU03 582 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 CTDSPLO15194 276 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 IFNA4P05014 189 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 AKAIN1P0CW23 69 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 CRYBB3P26998 211 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 TMEM187Q14656 261 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 BSXQ3C1V8 233 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 STHQ8IWL8 128 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 OR4D10Q8NGI6 311 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 GLYATL2Q8WU03 294 aa9.16□□□□□ -0.94
COL6A1-205ENST00000492851 NAA50Q9GZZ1 169 aaKnown RBP9.16□□□□□ -0.94
COL6A1-205ENST00000492851 HELTA6NFD8 242 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 CA1P00915 261 aaPredicted RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 OR5AC1P0C628 307 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 TCTAP57738 103 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 DEFB131AP59861 70 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 C2orf83Q53S99 150 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 MORN3Q6PF18 240 aaPredicted RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 Q6ZRM9 215 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 OR1S2Q8NGQ3 325 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 C11orf45Q8TAV5 145 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 SMIM4Q8WVI0 70 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 IL22RA2Q969J5 263 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 DIRAS2Q96HU8 199 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 BCL7BQ9BQE9 202 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 RTBDNQ9BSG5 229 aaPredicted RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 MIXL1Q9H2W2 232 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
COL6A1-205ENST00000492851 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 SCP2D1Q9UJQ7 156 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 GPR132Q9UNW8 380 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
COL6A1-205ENST00000492851 CRYM-AS1A6NIL9 109 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 CTDSP2O14595 271 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 SMIM18P0DKX4 95 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 SPP1P10451 314 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 P2RY1P47900 373 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 ALDH3B2P48448 385 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 ATP5IP56385 69 aaPredicted RBP9.14□□□□□ -0.95
COL6A1-205ENST00000492851 YPEL3P61236 119 aaPredicted RBP9.14□□□□□ -0.95
COL6A1-205ENST00000492851 EWSR1Q01844 656 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL6A1-205ENST00000492851 IL18Q14116 193 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 ZNF124Q15973 351 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 SELENOHQ8IZQ5 122 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms