RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	PTTG1	O95997	202 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	CTSG	P08311	255 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	FOLR2	P14207	255 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	SPN	P16150	400 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	NPY1R	P25929	384 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	OPRK1	P41145	380 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	IFITM3	Q01628	133 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	GGNBP1	Q5YKI7	109 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	LCN12	Q6JVE5	192 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	DTD1	Q8TEA8	209 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	DYNLRB2	Q8TF09	96 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	MARC2	Q969Z3	335 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	PRR25	Q96S07	402 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	RBKS	Q9H477	322 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	GPN1	Q9HCN4	374 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	TECR	Q9NZ01	308 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451		U3KQ87	197 aa		10.5	□□□□□ -0.73
PTPN7-215	ENST00000492451	TRAV6	A0A075B6T7	132 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	IFNA10	P01566	189 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	IGHV3-48	P01763	117 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	GP9	P14770	177 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	CBLN1	P23435	193 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	ETFRF1	Q6IPR1	90 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	MITD1	Q8WV92	249 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	CHRDL1	Q9BU40	450 aa		10.49	□□□□□ -0.73
PTPN7-215	ENST00000492451	IGHV3-35	A0A0C4DH35	117 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	TMEM213	A2RRL7	107 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	SLC25A4	P12235	298 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	ADM	P35318	185 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	UNQ9165/PRO28630	Q6UXU0	137 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	NRARP	Q7Z6K4	114 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	HAPLN4	Q86UW8	402 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	OR4X1	Q8NH49	305 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	TMEM190	Q8WZ59	177 aa		10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	CIB3	Q96Q77	187 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451	MRPL27	Q9P0M9	148 aa	Known RBP	10.48	□□□□□ -0.73
PTPN7-215	ENST00000492451		K7EMT4	169 aa		10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	ADAP1	O75689	374 aa		10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	TMEM50A	O95807	157 aa		10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	RPP30	P78346	268 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	RGS21	Q2M5E4	152 aa		10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	DEFB114	Q30KQ6	69 aa		10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	ADAMTSL5	Q6ZMM2	481 aa		10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	DAZ1	Q9NQZ3	744 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	LSM4	Q9Y4Z0	139 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-215	ENST00000492451	TRAV30	A0A087WSZ9	112 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	C15orf62	A8K5M9	175 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	INMT-MINDY4	F8WBC2	141 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	SYNGR2	O43760	224 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	CLN5	O75503	358 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	IL5	P05113	134 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	C8orf88	P0DMB2	117 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	TM4SF20	Q53R12	229 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	UXS1	Q8NBZ7	420 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	ZNF431	Q8TF32	576 aa	Predicted RBP	10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	MARVELD1	Q9BSK0	173 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	C20orf24	Q9BUV8	137 aa		10.46	□□□□□ -0.73
PTPN7-215	ENST00000492451	YIF1A	O95070	293 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	IFNA4	P05014	189 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	RAB11A	P62491	216 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	MLANA	Q16655	118 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	CD300E	Q496F6	205 aa	Predicted RBP	10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	ZNF600	Q6ZNG1	722 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	GTSCR1	Q86UQ5	136 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	TMEM116	Q8NCL8	245 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	OR52B4	Q8NGK2	314 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	TMEM170A	Q8WVE7	144 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	CACNG8	Q8WXS5	425 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	OR10C1	Q96KK4	312 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	GINS3	Q9BRX5	216 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	SMAD5-AS1	Q9Y6J3	95 aa		10.45	□□□□□ -0.74
PTPN7-215	ENST00000492451	COL7A1	Q02388	2944 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	MPTX1	A8MV57	137 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	SNRPGP15	A8MWD9	76 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	WRB	O00258	174 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	IAPP	P10997	89 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	EDN2	P20800	178 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	GPX4	P36969	197 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	NKX2-1	P43699	371 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	ID3	Q02535	119 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	IAH1	Q2TAA2	248 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	C11orf87	Q6NUJ2	197 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	PRSS54	Q6PEW0	395 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	OR4D5	Q8NGN0	318 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	SEC22C	Q9BRL7	303 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	MAGT1	Q9H0U3	335 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	MLX	Q9UH92	298 aa		10.44	□□□□□ -0.74
PTPN7-215	ENST00000492451	TRAV25	A0A0B4J276	109 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	IZUMO1R	A6ND01	250 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	BMI1	P35226	326 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	RND2	P52198	227 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	CD69	Q07108	199 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	BTNL8	Q6UX41	500 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	TOMM20L	Q6UXN7	152 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	SLC16A13	Q7RTY0	426 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	OR1S2	Q8NGQ3	325 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	B9D2	Q9BPU9	175 aa		10.43	□□□□□ -0.74
PTPN7-215	ENST00000492451	MRPL36	Q9P0J6	103 aa	Known RBP	10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms