RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GPR146Q96CH1 333 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 TSC22D3Q99576 134 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 SCRT1Q9BWW7 348 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 FKBP11Q9NYL4 201 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 FBXL17Q9UF56 701 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 CYB5BO43169 146 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 CA1P00915 261 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-211ENST00000491581 IGKV1-17P01599 117 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 CD74P04233 296 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 ZNF688P0C7X2 276 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 UCP1P25874 307 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 OPRK1P41145 380 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 ALDH3B2P48448 385 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
HDAC3-211ENST00000491581 RELQ04864 619 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-211ENST00000491581 PVRIGQ6DKI7 326 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 STEAP1BQ6NZ63 245 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 LPCAT3Q6P1A2 487 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 ZNF767PQ75MW2 155 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 FAM219AQ8IW50 185 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 SELENOHQ8IZQ5 122 aaKnown RBP6.5□□□□□ -1.37
HDAC3-211ENST00000491581 CADM3Q8N126 398 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 TMEM229BQ8NBD8 167 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 STXBP6Q8NFX7 210 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 OR4C16Q8NGL9 310 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 OR11H2Q8NH07 326 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 PHLDA1Q8WV24 401 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-211ENST00000491581 GALNT14Q96FL9 552 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 CMTM3Q96MX0 182 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 CSTL1Q9H114 145 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 VSIRQ9H7M9 311 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 RABAC1Q9UI14 185 aa6.5□□□□□ -1.37
HDAC3-211ENST00000491581 RBMY1A1P0DJD3 496 aaKnown RBP6.49□□□□□ -1.37
HDAC3-211ENST00000491581 RBMY1CP0DJD4 496 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 PRB4P10163 310 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-211ENST00000491581 SNCAP37840 140 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 RBMY1FQ15415 496 aaKnown RBP6.49□□□□□ -1.37
HDAC3-211ENST00000491581 TMEM268Q5VZI3 342 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 MZT2AQ6P582 158 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 ZNF600Q6ZNG1 722 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 CLVS1Q8IUQ0 354 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-211ENST00000491581 DUSP18Q8NEJ0 188 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 TERB2Q8NHR7 220 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 RNASE11Q8TAA1 199 aaKnown RBP6.49□□□□□ -1.37
HDAC3-211ENST00000491581 RARRES2Q99969 163 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 CACNG5Q9UF02 275 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 TP53TG1Q9Y2A0 90 aa6.49□□□□□ -1.37
HDAC3-211ENST00000491581 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 KIR2DL5BA0A0G2JN68 375 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 KIR2DL5BA0A0G2JPC4 375 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 MPTX1A8MV57 137 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 K7EQG2 157 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 DNASE2O00115 360 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-211ENST00000491581 CLN5O75503 358 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 S100GP29377 79 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 P2RY1P47900 373 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 RND2P52198 227 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 TAS2R19P59542 299 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 USF2Q15853 346 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-211ENST00000491581 BSXQ3C1V8 233 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 PRSS54Q6PEW0 395 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 KIR2DL5AQ8N109 375 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 ARRDC1Q8N5I2 433 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 OR51S1Q8NGJ8 323 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 KIR2DL5BQ8NHK3 375 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 TXN2Q99757 166 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 NAA60Q9H7X0 242 aa6.48□□□□□ -1.37
HDAC3-211ENST00000491581 FAM212BQ9NTI7 297 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-211ENST00000491581 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 TEX13DA0A0J9YY54 714 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-211ENST00000491581 NUPR2A6NF83 97 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 UBE2CO00762 179 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 CDS2O95674 445 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 IGLC1P0CG04 106 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 FXYD7P58549 80 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 SUPT4H1P63272 117 aaKnown RBP6.47□□□□□ -1.37
HDAC3-211ENST00000491581 DHODHQ02127 395 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 IL18Q14116 193 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 GDF5OSQ5U4N7 250 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 LYZL2Q7Z4W2 148 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 Q8NAQ8 132 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 DYNC2LI1Q8TCX1 351 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 RRNAD1Q96FB5 475 aaKnown RBP6.47□□□□□ -1.37
HDAC3-211ENST00000491581 ZNF486Q96H40 463 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-211ENST00000491581 ACY3Q96HD9 319 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 ATP6V0BQ99437 205 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 PDCD10Q9BUL8 212 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-211ENST00000491581 CELA1Q9UNI1 258 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 GPR132Q9UNW8 380 aa6.47□□□□□ -1.37
HDAC3-211ENST00000491581 ELOA3CA0A087WX78 387 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-211ENST00000491581 IGHV4-28A0A0C4DH34 117 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms