RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 A0A0G2JRQ6 117 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 TEX13DA0A0J9YY54 714 aaPredicted RBP6.13□□□□□ -1.43
LSM2-213ENST00000491421 INS-IGF2F8WCM5 200 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 CORTO00230 105 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 UBE2CO00762 179 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 JTBO76095 146 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 OR5AC1P0C628 307 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 RNASE2P10153 161 aaKnown RBP6.13□□□□□ -1.43
LSM2-213ENST00000491421 BMI1P35226 326 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 TFPI2P48307 235 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 SUB1P53999 127 aaKnown RBP eCLIP6.13□□□□□ -1.435e-9■■■■■ 41.1
LSM2-213ENST00000491421 IL18Q14116 193 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 SURF2Q15527 256 aaPredicted RBP6.13□□□□□ -1.43
LSM2-213ENST00000491421 DEFB135Q30KP9 77 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 Q6ZWC4 215 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 FAM219AQ8IW50 185 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 KIR2DL5AQ8N109 375 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 STPG3Q8N7X2 389 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 KIR2DL5BQ8NHK3 375 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 RAB2BQ8WUD1 216 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 DIRAS2Q96HU8 199 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 C6orf62Q9GZU0 229 aaPredicted RBP6.13□□□□□ -1.43
LSM2-213ENST00000491421 CCDC59Q9P031 241 aaKnown RBP6.13□□□□□ -1.43
LSM2-213ENST00000491421 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 IGKV3-7A0A075B6H7 116 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 CTDSPLO15194 276 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 SPRY2O43597 315 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 NOL3O60936 208 aaKnown RBP6.12□□□□□ -1.43
LSM2-213ENST00000491421 SCGB2A1O75556 95 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 CDS2O95674 445 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 AKAIN1P0CW23 69 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 RPL35AP18077 110 aaKnown RBP6.12□□□□□ -1.43
LSM2-213ENST00000491421 OPRK1P41145 380 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 TMBIM6P55061 237 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 CMC4P56277 68 aaPredicted RBP6.12□□□□□ -1.43
LSM2-213ENST00000491421 DHODHQ02127 395 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 PVRIGQ6DKI7 326 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 TOMM20LQ6UXN7 152 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 ZNF600Q6ZNG1 722 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 APRG1Q8IVJ8 170 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 GBGT1Q8N5D6 347 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 OR4C16Q8NGL9 310 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 DYNC2LI1Q8TCX1 351 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 RBPMSQ93062 196 aaKnown RBP6.12□□□□□ -1.43
LSM2-213ENST00000491421 GALNT14Q96FL9 552 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 FAM210AQ96ND0 272 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 PRRT1Q99946 306 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 BCL7BQ9BQE9 202 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 RTBDNQ9BSG5 229 aaPredicted RBP6.12□□□□□ -1.43
LSM2-213ENST00000491421 NAA60Q9H7X0 242 aa6.12□□□□□ -1.43
LSM2-213ENST00000491421 PUS1Q9Y606 427 aaKnown RBP eCLIP6.12□□□□□ -1.43
LSM2-213ENST00000491421 IGHV3-66A0A0C4DH42 116 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 A0A0J9YWU9 116 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 CXorf65A6NEN9 183 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 CRYM-AS1A6NIL9 109 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 TMEM50AO95807 157 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 APOHP02749 345 aaPredicted RBP6.11□□□□□ -1.43
LSM2-213ENST00000491421 CD5P06127 495 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 SPCS3P61009 180 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 PAFAH1B2P68402 229 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 PMS2P11Q13670 270 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 BSXQ3C1V8 233 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 AARDQ4LEZ3 155 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 TMEM268Q5VZI3 342 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 FAM90A2PQ658T7 463 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 Q6ZRM9 215 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 TCF24Q7RTU0 167 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 LYG2Q86SG7 212 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 WFDC3Q8IUB2 231 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 OR51S1Q8NGJ8 323 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 LHFPL5Q8TAF8 219 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 GLYATL2Q8WU03 294 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 ST8SIA2Q92186 375 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 RNF183Q96D59 192 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 FNDC4Q9H6D8 234 aaPredicted RBP6.11□□□□□ -1.43
LSM2-213ENST00000491421 VSIRQ9H7M9 311 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 ZFAND3Q9H8U3 227 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 MAP6D1Q9H9H5 199 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.11□□□□□ -1.43
LSM2-213ENST00000491421 CACNG5Q9UF02 275 aa6.11□□□□□ -1.43
LSM2-213ENST00000491421 RSL24D1Q9UHA3 163 aaKnown RBP6.11□□□□□ -1.43
LSM2-213ENST00000491421 PLECQ15149 4684 aaKnown RBP6.11□□□□□ -1.43
LSM2-213ENST00000491421 A0A1B0GU03 582 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 ANKRD20A5PA0PJZ0 165 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 CEBPZOSA8MTT3 80 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 DNASE2O00115 360 aaPredicted RBP6.1□□□□□ -1.43
LSM2-213ENST00000491421 GSTZ1O43708 216 aaPredicted RBP6.1□□□□□ -1.43
LSM2-213ENST00000491421 CLN5O75503 358 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 DFFBO76075 338 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 NPPCP23582 126 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 HTR2BP41595 481 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 RPL5P46777 297 aaKnown RBP6.1□□□□□ -1.43
LSM2-213ENST00000491421 RPL11P62913 178 aaKnown RBP6.1□□□□□ -1.43
LSM2-213ENST00000491421 TNFRSF9Q07011 255 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 ZNF124Q15973 351 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 MLANAQ16655 118 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 DMRTA1Q5VZB9 504 aa6.1□□□□□ -1.43
LSM2-213ENST00000491421 SELENOHQ8IZQ5 122 aaKnown RBP6.1□□□□□ -1.43
LSM2-213ENST00000491421 OR4X1Q8NH49 305 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms