RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
TRAIP-211ENST00000491060 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
TRAIP-211ENST00000491060 TCF24Q7RTU0 167 aa10.13□□□□□ -0.79
TRAIP-211ENST00000491060 CADM3Q8N126 398 aa10.13□□□□□ -0.79
TRAIP-211ENST00000491060 SPAG8Q99932 426 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-211ENST00000491060 BCL7BQ9BQE9 202 aa10.13□□□□□ -0.79
TRAIP-211ENST00000491060 FNDC4Q9H6D8 234 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-211ENST00000491060 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-211ENST00000491060 SCP2D1Q9UJQ7 156 aa10.13□□□□□ -0.79
TRAIP-211ENST00000491060 A0A1B0GU03 582 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 C15orf62A8K5M9 175 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 TSPAN4O14817 238 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 CDS2O95674 445 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 TMEM50AO95807 157 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 S100A5P33763 92 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 SPCS3P61009 180 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 TMEM187Q14656 261 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 LYZL2Q7Z4W2 148 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 LILRB2Q8N423 598 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 TOMM5Q8N4H5 51 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 TXN2Q99757 166 aa10.12□□□□□ -0.79
TRAIP-211ENST00000491060 PAIP2BQ9ULR5 123 aaKnown RBP10.12□□□□□ -0.79
TRAIP-211ENST00000491060 OR4C46A6NHA9 309 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 K7EMT4 169 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 DFFBO76075 338 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 PMS2P11Q13670 270 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
TRAIP-211ENST00000491060 LEMD1Q68G75 181 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 ZNF600Q6ZNG1 722 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 ACY3Q96HD9 319 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 RABAC1Q9UI14 185 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 KCNIP3Q9Y2W7 256 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 V9GYH0 126 aa10.11□□□□□ -0.79
TRAIP-211ENST00000491060 STARD9Q9P2P6 4700 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 DNASE2O00115 360 aaPredicted RBP10.1□□□□□ -0.79
TRAIP-211ENST00000491060 IFNA10P01566 189 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 SULT1A3P0DMM9 295 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 SULT1A4P0DMN0 295 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 IAPPP10997 89 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 VAMP1P23763 118 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 FCGR2BP31994 310 aaPredicted RBP10.1□□□□□ -0.79
TRAIP-211ENST00000491060 RND2P52198 227 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
TRAIP-211ENST00000491060 GSG1LQ6UXU4 331 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 FAM24BQ8N5W8 94 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 SLC24A4Q8NFF2 622 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 OR1S1Q8NH92 325 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 SOSTQ9BQB4 213 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 OVOL2Q9BRP0 275 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 RBKSQ9H477 322 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 RABL2AQ9UBK7 228 aaPredicted RBP10.1□□□□□ -0.79
TRAIP-211ENST00000491060 RABL2BQ9UNT1 228 aa10.1□□□□□ -0.79
TRAIP-211ENST00000491060 DYNC2H1Q8NCM8 4307 aaKnown RBP10.1□□□□□ -0.79
TRAIP-211ENST00000491060 CLN5O75503 358 aa10.09□□□□□ -0.79
TRAIP-211ENST00000491060 INPP1P49441 399 aa10.09□□□□□ -0.79
TRAIP-211ENST00000491060 SUPT4H1P63272 117 aaKnown RBP10.09□□□□□ -0.79
TRAIP-211ENST00000491060 ZNF79Q15937 498 aa10.09□□□□□ -0.79
TRAIP-211ENST00000491060 FAM219AQ8IW50 185 aa10.09□□□□□ -0.79
TRAIP-211ENST00000491060 STXBP6Q8NFX7 210 aa10.09□□□□□ -0.79
TRAIP-211ENST00000491060 SCGB3A2Q96PL1 93 aa10.09□□□□□ -0.79
TRAIP-211ENST00000491060 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 CORTO00230 105 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 B3GALNT1O75752 331 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 NPY1RP25929 384 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 FAUP35544 74 aaKnown RBP10.08□□□□□ -0.8
TRAIP-211ENST00000491060 HTR2BP41595 481 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 CCR6P51684 374 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 RBMS2Q15434 407 aaKnown RBP10.08□□□□□ -0.8
TRAIP-211ENST00000491060 TMEM170AQ8WVE7 144 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 TRIM63Q969Q1 353 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 OR10C1Q96KK4 312 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 MS4A6AQ9H2W1 248 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 MAP6D1Q9H9H5 199 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 AGRNO00468 2067 aa10.08□□□□□ -0.8
TRAIP-211ENST00000491060 RPS10-NUDT3A0A1W2PQS6 291 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 SPRY2O43597 315 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 HOXB5P09067 269 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 ANXA3P12429 323 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 NPPCP23582 126 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 APOC4P55056 127 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 DEFB131AP59861 70 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 SMCO1Q147U7 214 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 PRSS54Q6PEW0 395 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 LGI3Q8N145 548 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 STPG3Q8N7X2 389 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 DTD1Q8TEA8 209 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 NPIPB3Q92617 1050 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 METTL26Q96S19 204 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 MAGT1Q9H0U3 335 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 RYR2Q92736 4967 aa10.07□□□□□ -0.8
TRAIP-211ENST00000491060 IFNA4P05014 189 aa10.06□□□□□ -0.8
TRAIP-211ENST00000491060 OR10J1P30954 320 aa10.06□□□□□ -0.8
TRAIP-211ENST00000491060 PAFAH1B2P68402 229 aa10.06□□□□□ -0.8
TRAIP-211ENST00000491060 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAIP-211ENST00000491060 CCDC190Q86UF4 302 aa10.06□□□□□ -0.8
TRAIP-211ENST00000491060 OR4X1Q8NH49 305 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms