RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 C21orf62Q9NYP8 219 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 IL4P05112 153 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 ATP5G2Q06055 141 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 ZNF726P1Q15940 193 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 SPRNQ5BIV9 151 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 DDB2Q92466 427 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 MRPL18Q9H0U6 180 aaKnown RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 OTORQ9NRC9 128 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 F11RQ9Y624 299 aaKnown RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 C1QTNF9BB2RNN3 333 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 UBE2CO00762 179 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 PHOX2AO14813 284 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 KLHDC1Q8N7A1 406 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 EAF1Q96JC9 268 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 IGHV3-48P01763 117 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 CLEC3BP05452 202 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 CAMPP49913 170 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 DSCR9P59020 149 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 LINC00574Q9H8X3 128 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 SEPSECSQ9HD40 501 aaKnown RBP5.96□□□□□ -1.45
NPHP3-208ENST00000490993 DLX6P56179 175 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 RPS20P60866 119 aaKnown RBP5.96□□□□□ -1.45
NPHP3-208ENST00000490993 FOXL1Q12952 345 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 MSMPQ1L6U9 139 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 VMO1Q7Z5L0 202 aa5.96□□□□□ -1.45
NPHP3-208ENST00000490993 SOX21Q9Y651 276 aaPredicted RBP5.96□□□□□ -1.45
NPHP3-208ENST00000490993 A0A1W2PS18 150 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 MFAP2P55001 183 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 KRTDAPP60985 99 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 KIR3DL3Q8N743 410 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 BPTFQ12830 3046 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 HEATR1Q9H583 2144 aaKnown RBP5.96□□□□□ -1.46
NPHP3-208ENST00000490993 MMP23AO75900 390 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 PMCHP20382 165 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 MDKP21741 143 aaPredicted RBP5.96□□□□□ -1.46
NPHP3-208ENST00000490993 FA2HQ7L5A8 372 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 OR2D3Q8NGH3 330 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 TMEM170AQ8WVE7 144 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 FBXL7Q9UJT9 491 aa5.96□□□□□ -1.46
NPHP3-208ENST00000490993 IGHV2-70P01814 119 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 P0C879 139 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 MYOD1P15172 320 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 GNLYP22749 145 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 C10orf55Q5SWW7 151 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 RNASEKQ6P5S7 137 aaKnown RBP5.95□□□□□ -1.46
NPHP3-208ENST00000490993 LINC01551Q86U37 167 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 GPR82Q96P67 336 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 ATG101Q9BSB4 218 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 PLA2G2EQ9NZK7 142 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 C5orf52A6NGY3 159 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 TMEM183BQ1AE95 376 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 SAPCD1Q5SSQ6 148 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 TEX38Q6PEX7 206 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 ZNF705AQ6ZN79 300 aaPredicted RBP5.95□□□□□ -1.46
NPHP3-208ENST00000490993 VAMP8Q9BV40 100 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 EPDR1Q9UM22 224 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 M0QZK8 103 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 SIAH2O43255 324 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 AMTP48728 403 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 PKIAP61925 76 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 C5orf64Q2M2E5 130 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 SPATA31B1PQ5VZV4 182 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 C1orf122Q6ZSJ8 110 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 OCC1Q8TAD7 63 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 C5orf30Q96GV9 206 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 OR2J3O76001 311 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 EIF4EBP1Q13541 118 aaPredicted RBP5.95□□□□□ -1.46
NPHP3-208ENST00000490993 TOMM20LQ6UXN7 152 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 Q9H3A6 140 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 MED13Q9UHV7 2174 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 HLA-DRB1P01911 266 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 CGB3P0DN86 165 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 CGB7P0DN87 165 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 SSX7Q7RTT5 188 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 OR4B1Q8NGF8 309 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 RNF125Q96EQ8 232 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 CDC42EP3Q9UKI2 254 aa5.95□□□□□ -1.46
NPHP3-208ENST00000490993 RP1L1Q8IWN7 2480 aaPredicted RBP5.95□□□□□ -1.46
NPHP3-208ENST00000490993 CEP350Q5VT06 3117 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 A0A1W2PPI3 338 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 TMEM189A5PLL7 270 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 IZUMO1RA6ND01 250 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 C1QTNF9P0C862 333 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 DAZAP2Q15038 168 aaPredicted RBP5.94□□□□□ -1.46
NPHP3-208ENST00000490993 CTSZQ9UBR2 303 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 PMS2P5A8MQ11 134 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 NDUFS8O00217 210 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 CXCL1P09341 107 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 ELOVL1Q9BW60 279 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 GPR61Q9BZJ8 451 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 YTHDF2Q9Y5A9 579 aaKnown RBP5.94□□□□□ -1.46
NPHP3-208ENST00000490993 MYO7BQ6PIF6 2116 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 FSTL3O95633 263 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 NPPCP23582 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 AARDQ4LEZ3 155 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 GOLT1AQ6ZVE7 132 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 ZNRD1Q9P1U0 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 A0A087X0M5 115 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 A0A1B0GX30 115 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 INS-IGF2F8WCM5 200 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms