RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
SRGAP3-209ENST00000490889 A0A087WXM4 84 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 K7EQG2 157 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 IFNA17P01571 189 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 C4BPBP20851 252 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 AKR1C2P52895 323 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 RBMY1FQ15415 496 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 SP6Q3SY56 376 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 ZNF486Q96H40 463 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 APLNQ9ULZ1 77 aa12.07□□□□□ -0.48
SRGAP3-209ENST00000490889 DNAH17Q9UFH2 4485 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 CLN5O75503 358 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 CD3DP04234 171 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 Q6ZRM9 215 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 STHQ8IWL8 128 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 STXBP6Q8NFX7 210 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 OR4D10Q8NGI6 311 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 VCX3AQ9NNX9 186 aa12.06□□□□□ -0.48
SRGAP3-209ENST00000490889 KNCNA6PVL3 124 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 IGKV1-17P01599 117 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 ZNF688P0C7X2 276 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 NPPCP23582 126 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 CRYBB3P26998 211 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 P2RY1P47900 373 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 HOXA1P49639 335 aaPredicted RBP12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 BSXQ3C1V8 233 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 RNASE10Q5GAN6 216 aaKnown RBP12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 OR4X1Q8NH49 305 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 OR52I2Q8NH67 350 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 TMEM231Q9H6L2 316 aa12.05□□□□□ -0.48
SRGAP3-209ENST00000490889 IGLL5B9A064 214 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 CORTO00230 105 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 OPRK1P41145 380 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 TRIM16LQ309B1 348 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 TIGITQ495A1 244 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 ARRDC1Q8N5I2 433 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 METTL26Q96S19 204 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 HRH4Q9H3N8 390 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 X6R8D5 127 aa12.04□□□□□ -0.48
SRGAP3-209ENST00000490889 A0A1W2PS18 150 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 ZNF705EA8MWA4 302 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 FAM25AB3EWG3 89 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 FAM25CB3EWG5 89 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 FAM25GB3EWG6 89 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 TNFAIP8O95379 198 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 UCP1P25874 307 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 RPL5P46777 297 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 TCTAP57738 103 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 Q6ZTC4 211 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 OR13C8Q8NGS7 320 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 ABHD1Q96SE0 405 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 CLEC5AQ9NY25 188 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 MTFP1Q9UDX5 166 aa12.03□□□□□ -0.48
SRGAP3-209ENST00000490889 ELOA3CA0A087WX78 387 aaPredicted RBP12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 SPP1P10451 314 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 HLA-DMBP28068 263 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 RORCP51449 518 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 ACTL10Q5JWF8 245 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 CSNK1G2-AS1Q8NCQ2 148 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 LHFPL5Q8TAF8 219 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 TMEM230Q96A57 120 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 NAA50Q9GZZ1 169 aaKnown RBP12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 COPZ2Q9P299 210 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 EXTL2Q9UBQ6 330 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 U3KQE9 123 aa12.02□□□□□ -0.49
SRGAP3-209ENST00000490889 C11orf94C9JXX5 98 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 ATG12O94817 140 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 CD74P04233 296 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 MIFP14174 115 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 AARDQ4LEZ3 155 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 MORN3Q6PF18 240 aaPredicted RBP12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 TERB2Q8NHR7 220 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 RRNAD1Q96FB5 475 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 ENY2Q9NPA8 101 aa12.01□□□□□ -0.49
SRGAP3-209ENST00000490889 DYNC1H1Q14204 4646 aaKnown RBP12□□□□□ -0.49
SRGAP3-209ENST00000490889 OR5AC1P0C628 307 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 IGLC1P0CG04 106 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 TBPP20226 339 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 SPCS3P61009 180 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 SCGB2B2Q4G0G5 96 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 TMEM41BQ5BJD5 291 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 PRSS54Q6PEW0 395 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 TMEM170AQ8WVE7 144 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 GLMPQ8WWB7 406 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 CELA1Q9UNI1 258 aa12□□□□□ -0.49
SRGAP3-209ENST00000490889 CDS2O95674 445 aa11.99□□□□□ -0.49
SRGAP3-209ENST00000490889 RND2P52198 227 aa11.99□□□□□ -0.49
SRGAP3-209ENST00000490889 DHRS2Q13268 280 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms