RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 BSXQ3C1V8 233 aa23.33■■□□□ 1.33
LDB1-204ENST00000490751 TOMM20LQ6UXN7 152 aa23.33■■□□□ 1.33
LDB1-204ENST00000490751 GINS3Q9BRX5 216 aa23.33■■□□□ 1.33
LDB1-204ENST00000490751 TMEM56-RWDD3S4R434 201 aa23.33■■□□□ 1.33
LDB1-204ENST00000490751 STARD9Q9P2P6 4700 aa23.33■■□□□ 1.32
LDB1-204ENST00000490751 IGHV3OR16-13A0A075B7E8 117 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 IGHV3-74A0A0B4J1X5 117 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 CCDC160A6NGH7 325 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 TMEM50AO95807 157 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 OPRK1P41145 380 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 ZNF600Q6ZNG1 722 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 SCGB3A2Q96PL1 93 aa23.32■■□□□ 1.32
LDB1-204ENST00000490751 FNDC4Q9H6D8 234 aaPredicted RBP23.32■■□□□ 1.32
LDB1-204ENST00000490751 GALNT14Q96FL9 552 aa23.31■■□□□ 1.32
LDB1-204ENST00000490751 PRR13Q9NZ81 148 aa23.31■■□□□ 1.32
LDB1-204ENST00000490751 MRPL36Q9P0J6 103 aaKnown RBP23.31■■□□□ 1.32
LDB1-204ENST00000490751 KCNIP3Q9Y2W7 256 aa23.31■■□□□ 1.32
LDB1-204ENST00000490751 PUS1Q9Y606 427 aaKnown RBP eCLIP23.31■■□□□ 1.32
LDB1-204ENST00000490751 CSMD3Q7Z407 3707 aa23.31■■□□□ 1.32
LDB1-204ENST00000490751 TMEM187Q14656 261 aa23.3■■□□□ 1.32
LDB1-204ENST00000490751 ZFAND3Q9H8U3 227 aa23.3■■□□□ 1.32
LDB1-204ENST00000490751 HEYLQ9NQ87 328 aaPredicted RBP23.3■■□□□ 1.32
LDB1-204ENST00000490751 HTR2BP41595 481 aa23.29■■□□□ 1.32
LDB1-204ENST00000490751 MLANAQ16655 118 aa23.29■■□□□ 1.32
LDB1-204ENST00000490751 IL22RA2Q969J5 263 aa23.29■■□□□ 1.32
LDB1-204ENST00000490751 IGKV3-7A0A075B6H7 116 aa23.28■■□□□ 1.32
LDB1-204ENST00000490751 CLN5O75503 358 aa23.28■■□□□ 1.32
LDB1-204ENST00000490751 OR4X1Q8NH49 305 aa23.28■■□□□ 1.32
LDB1-204ENST00000490751 OVOL2Q9BRP0 275 aa23.28■■□□□ 1.32
LDB1-204ENST00000490751 A0A1B0GU03 582 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 CEBPZOSA8MTT3 80 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 AKR1C4P17516 323 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 TFPI2P48307 235 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 PYDC2Q56P42 97 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 FAM90A2PQ658T7 463 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 ST8SIA2Q92186 375 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 TRIM63Q969Q1 353 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 V9GYH0 126 aa23.27■■□□□ 1.32
LDB1-204ENST00000490751 NXPH3O95157 252 aa23.26■■□□□ 1.31
LDB1-204ENST00000490751 BMI1P35226 326 aa23.26■■□□□ 1.31
LDB1-204ENST00000490751 FAUP35544 74 aaKnown RBP23.26■■□□□ 1.31
LDB1-204ENST00000490751 APOC4P55056 127 aa23.26■■□□□ 1.31
LDB1-204ENST00000490751 KLF9Q13886 244 aaPredicted RBP23.26■■□□□ 1.31
LDB1-204ENST00000490751 TCF24Q7RTU0 167 aa23.26■■□□□ 1.31
LDB1-204ENST00000490751 SACSQ9NZJ4 4579 aa23.26■■□□□ 1.31
LDB1-204ENST00000490751 APOHP02749 345 aaPredicted RBP23.25■■□□□ 1.31
LDB1-204ENST00000490751 SULT1A3P0DMM9 295 aa23.25■■□□□ 1.31
LDB1-204ENST00000490751 SULT1A4P0DMN0 295 aa23.25■■□□□ 1.31
LDB1-204ENST00000490751 SUPT4H1P63272 117 aaKnown RBP23.25■■□□□ 1.31
LDB1-204ENST00000490751 SLC24A4Q8NFF2 622 aa23.25■■□□□ 1.31
LDB1-204ENST00000490751 VSIRQ9H7M9 311 aa23.25■■□□□ 1.31
LDB1-204ENST00000490751 RPS10-NUDT3A0A1W2PQS6 291 aa23.24■■□□□ 1.31
LDB1-204ENST00000490751 C2orf83Q53S99 150 aa23.24■■□□□ 1.31
LDB1-204ENST00000490751 GBGT1Q8N5D6 347 aa23.24■■□□□ 1.31
LDB1-204ENST00000490751 IL17DQ8TAD2 202 aa23.24■■□□□ 1.31
LDB1-204ENST00000490751 TENM2Q9NT68 2774 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 IGHV3-66A0A0C4DH42 116 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 SCGB2A1O75556 95 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 S100A5P33763 92 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 AP3S2P59780 193 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 APRG1Q8IVJ8 170 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 TOMM5Q8N4H5 51 aa23.23■■□□□ 1.31
LDB1-204ENST00000490751 RBM38Q9H0Z9 239 aaKnown RBP23.23■■□□□ 1.31
LDB1-204ENST00000490751 A0A0B4J2A0 478 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 CD5P06127 495 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 ANXA3P12429 323 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 RPL35AP18077 110 aaKnown RBP23.22■■□□□ 1.31
LDB1-204ENST00000490751 ZNF79Q15937 498 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 LYZL2Q7Z4W2 148 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 LILRB2Q8N423 598 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 RNASEH2CQ8TDP1 164 aaKnown RBP23.22■■□□□ 1.31
LDB1-204ENST00000490751 CACFD1Q9UGQ2 172 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 SHPKQ9UHJ6 478 aa23.22■■□□□ 1.31
LDB1-204ENST00000490751 PAFAH1B2P68402 229 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 ZNF124Q15973 351 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 TIGITQ495A1 244 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 NMSQ5H8A3 153 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 Q6ZWC4 215 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 LGI3Q8N145 548 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 TMEM170AQ8WVE7 144 aa23.21■■□□□ 1.31
LDB1-204ENST00000490751 KIR2DL5BA0A0G2JN68 375 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 KIR2DL5BA0A0G2JPC4 375 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 LCE6AA0A183 80 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 UBE2CO00762 179 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 DFFBO76075 338 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 IGKV1-17P01599 117 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 NPPCP23582 126 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 CCR6P51684 374 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 CMC4P56277 68 aaPredicted RBP23.2■■□□□ 1.3
LDB1-204ENST00000490751 SRPXP78539 464 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 DEFB135Q30KP9 77 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 TMED4Q7Z7H5 227 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 KIR2DL5AQ8N109 375 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 KIR2DL5BQ8NHK3 375 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 TMEM231Q9H6L2 316 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 MAP6D1Q9H9H5 199 aa23.2■■□□□ 1.3
LDB1-204ENST00000490751 TRAV30A0A087WSZ9 112 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 SLC25A4P12235 298 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 NPY1RP25929 384 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 RND2P52198 227 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms