RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 OR4X1Q8NH49 305 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 RAX2Q96IS3 184 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 MCRIP2Q9BUT9 160 aaKnown RBP15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 GPR61Q9BZJ8 451 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 ZNF436Q9C0F3 470 aaPredicted RBP15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 ANKRD34BA5PLL1 514 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 TGOLN2O43493 480 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 CLEC3BP05452 202 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 CAV2P51636 162 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 TMEM14EPQ6UXP3 125 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 CLEC19AQ6UXS0 136 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 C18orf65Q6ZTR6 163 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 OR10P1Q8NGE3 313 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 CCDC140Q96MF4 163 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 SLC25A31Q9H0C2 315 aa15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 LYRM2Q9NU23 88 aaPredicted RBP15.32■□□□□ 0.04
SHROOM3-209ENST00000490690 GPR183P32249 361 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 P2RY1P47900 373 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 HBG1P69891 147 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 HBG2P69892 147 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 DEFA5Q01523 94 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 DEFB136Q30KP8 78 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 LRRC37A5PQ49AS3 106 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 FAM106AQ4KMX7 169 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 SLC16A13Q7RTY0 426 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 UBAC2Q8NBM4 344 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 TMEM116Q8NCL8 245 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 OR11H7Q8NGC8 314 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 THAP6Q8TBB0 222 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 GGACTQ9BVM4 153 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 ANK2Q01484 3957 aa15.31■□□□□ 0.04
SHROOM3-209ENST00000490690 IGHV4OR15-8A0A075B7B6 117 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 A0A087WW49 117 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 FNDC10F2Z333 226 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 H3BP45 60 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 CLN5O75503 358 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 MPC2O95563 127 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 FABP1P07148 127 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 CXCL3P19876 107 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 HOXD3P31249 432 aaPredicted RBP15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 PAX9P55771 341 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 Q6ZNX1 250 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 TMEM170AQ8WVE7 144 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 OR4C12Q96R67 309 aa15.3■□□□□ 0.04
SHROOM3-209ENST00000490690 TSPAN15O95858 294 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 CD33P20138 364 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 BAXQ07812 192 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 PRSS54Q6PEW0 395 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 GPHB5Q86YW7 130 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 C1QL4Q86Z23 238 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 OR1S2Q8NGQ3 325 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 FNDC4Q9H6D8 234 aaPredicted RBP15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 PEMTQ9UBM1 199 aa15.29■□□□□ 0.04
SHROOM3-209ENST00000490690 IGHV3-21A0A0B4J1V1 117 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 OR2T8A6NH00 312 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 BMPR1BO00238 502 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 TMEM50AO95807 157 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 IGHV3-23P01764 117 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 SULT1A1P50225 295 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 DLK1P80370 383 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 HIST2H2BDQ6DRA6 164 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 LINC00482Q8N8I6 264 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 WFDC9Q8NEX5 89 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 ELOVL1Q9BW60 279 aa15.28■□□□□ 0.04
SHROOM3-209ENST00000490690 S100A11P31949 105 aa15.27■□□□□ 0.04
SHROOM3-209ENST00000490690 NUP62P37198 522 aaPredicted RBP15.27■□□□□ 0.04
SHROOM3-209ENST00000490690 RND2P52198 227 aa15.27■□□□□ 0.04
SHROOM3-209ENST00000490690 OR8G2PQ6IF36 304 aa15.27■□□□□ 0.04
SHROOM3-209ENST00000490690 C11orf1Q9H5F2 150 aa15.27■□□□□ 0.04
SHROOM3-209ENST00000490690 S4R3C0 116 aa15.27■□□□□ 0.04
SHROOM3-209ENST00000490690 LGALS9O00182 355 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 NDUFA4O00483 81 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 OVOL1O14753 267 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 METTL15P1P0C7V9 234 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 KLF5Q13887 457 aaPredicted RBP15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 ATP6V1FQ16864 119 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 TREML4Q6UXN2 200 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 ACY3Q96HD9 319 aa15.26■□□□□ 0.03
SHROOM3-209ENST00000490690 PPP5D1E7EU14 171 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 TRBV12-3P01733 135 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 CTSGP08311 255 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 OR10J1P30954 320 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 INSL3P51460 131 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 ELLP55199 621 aaPredicted RBP15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 AKR1C1Q04828 323 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 C11orf87Q6NUJ2 197 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 ZNF600Q6ZNG1 722 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 REC114Q7Z4M0 266 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 TMEM252Q8N6L7 170 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 DUX3Q96PT4 197 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 ZMAT5Q9UDW3 170 aaKnown RBP15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 UFC1Q9Y3C8 167 aa15.25■□□□□ 0.03
SHROOM3-209ENST00000490690 PRSS46E5RG02 174 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 F8W735 103 aaPredicted RBP15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 CFDP00746 253 aaPredicted RBP15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 LYL1P12980 280 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 SLURP1P55000 103 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 YPEL3P61236 119 aaPredicted RBP15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 GAMTQ14353 236 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms