RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 RAB4BP61018 213 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 OR2F1Q13607 317 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 RHEBQ15382 184 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 SPANXN5Q5MJ07 72 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 ANKRD29Q8N6D5 301 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 SIGLECL1Q8N7X8 197 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 NIPSNAP1Q9BPW8 284 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 PRTFDC1Q9NRG1 225 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 WRNQ14191 1432 aaPredicted RBP eCLIP0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 RIC1Q4ADV7 1423 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 TRBV6-8A0A0A6YYG3 113 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 EXOC1LA0A1B0GW35 172 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 IFNA5P01569 189 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 MGST1P10620 155 aaKnown RBP0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 C20orf196Q8IYI0 205 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 Q8N814 137 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 OR52R1Q8NGF1 315 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 TOMM6Q96B49 74 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 COMMD5Q9GZQ3 224 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 SLC39A9Q9NUM3 307 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 ERGIC3Q9Y282 383 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 SCN10AQ9Y5Y9 1956 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 MTUS2Q5JR59 1369 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 MAP3K5Q99683 1374 aa0.68□□□□□ -2.3
PRPF4B-207ENST00000490399 TRAV9-1A0A075B6T8 112 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 MIFP14174 115 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 NKX2-5P52952 324 aaPredicted RBP0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 CDC42P60953 191 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 HIST3H3Q16695 136 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 LPCAT3Q6P1A2 487 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 HIST3H2BBQ8N257 126 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 ZNF418Q8TF45 676 aaPredicted RBP0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 SNAPC4Q5SXM2 1469 aa0.67□□□□□ -2.3
PRPF4B-207ENST00000490399 TRAV3A0A0B4J244 114 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 UBL3O95164 117 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 CD79AP11912 226 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 COX6A1P12074 109 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 PSME3P61289 254 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 CNBPP62633 177 aaKnown RBP0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 LINC00526Q96FQ7 95 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 OR52E6Q96RD3 313 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 ACER3Q9NUN7 267 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 TAS2R4Q9NYW5 299 aa0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
PRPF4B-207ENST00000490399 COL6A3P12111 3177 aa0.65□□□□□ -2.3
PRPF4B-207ENST00000490399 MYH10P35580 1976 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 CHP2O43745 196 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 LYZL6O75951 148 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 SPOPLQ6IQ16 392 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 SFT2D1Q8WV19 159 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 TSPAN32Q96QS1 320 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 TMEM56-RWDD3S4R434 201 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 APCP25054 2843 aa0.65□□□□□ -2.31
PRPF4B-207ENST00000490399 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 OR4C46A6NHA9 309 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 SULT1B1O43704 296 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 OR2J2O76002 312 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 AHSA1O95433 338 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 CRYZL1O95825 349 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 IFNA10P01566 189 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 MAGOHP61326 146 aaKnown RBP0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 RHOGP84095 191 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 DEFB113Q30KQ7 82 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 ACOT6Q3I5F7 207 aaPredicted RBP0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 CCDC122Q5T0U0 273 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 PARD6GQ9BYG4 376 aaPredicted RBP0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 MIXL1Q9H2W2 232 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 MRPL27Q9P0M9 148 aaKnown RBP0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 UNC13CQ8NB66 2214 aa0.64□□□□□ -2.31
PRPF4B-207ENST00000490399 SBF1O95248 1867 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 NUP155O75694 1391 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 TCL1BO95988 128 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 BAALC-AS2P0C853 105 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 SULT1A1P50225 295 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 GDF5OSQ5U4N7 250 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 GPR146Q96CH1 333 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 OSTCQ9NRP0 149 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 CHD3Q12873 2000 aaKnown RBP0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 TAF1LQ8IZX4 1826 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 SCN8AQ9UQD0 1980 aa0.63□□□□□ -2.31
PRPF4B-207ENST00000490399 TRAV12-1A0A0B4J245 112 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 TRAV26-2A0A0B4J265 109 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 FAM236DA0A1B0GTK5 79 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 GOLGA6L19H0YKK7 550 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 IFNA16P05015 189 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 FAM236CP0DP71 79 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 ZNF25P17030 456 aaPredicted RBP0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 OR51V1Q9H2C8 321 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 CDC42SE1Q9NRR8 79 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 E9PCH4 1651 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 MYH7BA7E2Y1 1941 aa0.62□□□□□ -2.31
PRPF4B-207ENST00000490399 ROBO3Q96MS0 1386 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 CCDC160A6NGH7 325 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 M0R2N4 97 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 OR2B3O76000 313 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 C1orf137Q5JT78 98 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 TEX261Q6UWH6 196 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 Q8N6K4 173 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms