RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TMEM50AO95807 157 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 IFNA10P01566 189 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 CSN3P07498 182 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 OPRK1P41145 380 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 MFAP4P55083 255 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 DEFA6Q01524 100 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 ZNF436Q9C0F3 470 aaPredicted RBP10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 TGP01266 2768 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 LGALS9O00182 355 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 WRBO00258 174 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 PTTG1O95997 202 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 NKX2-1P43699 371 aaPredicted RBP10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 SPSB3Q6PJ21 355 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 REC114Q7Z4M0 266 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 RNASEH2CQ8TDP1 164 aaKnown RBP10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 OR4C12Q96R67 309 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 TXN2Q99757 166 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 GPR61Q9BZJ8 451 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 GSKIPQ9P0R6 139 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 SORL1Q92673 2214 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 SNRPGP15A8MWD9 76 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 FAM25EA8MYX2 175 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 PRAF2O60831 178 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 PFDN1O60925 122 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 MED6O75586 246 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 INSL3P51460 131 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 PRSS54Q6PEW0 395 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 Q6ZNX1 250 aa10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 RCL1Q9Y2P8 373 aaKnown RBP10.93□□□□□ -0.66
SRGAP3-208ENST00000490348 ZNF320A2RRD8 509 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 TMEM213A2RRL7 107 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 A8MWP6 167 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 H3BP45 60 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 SSSCA1O60232 199 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 PAX9P55771 341 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 IL15RAQ13261 267 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 TATDN3Q17R31 274 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 OR4X1Q8NH49 305 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 CACNG8Q8WXS5 425 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 ELOVL1Q9BW60 279 aa10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 GPN1Q9HCN4 374 aaPredicted RBP10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 AURKAIP1Q9NWT8 199 aaPredicted RBP10.92□□□□□ -0.66
SRGAP3-208ENST00000490348 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 C5orf51A6NDU8 294 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 GNG7O60262 68 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 SCGB1D2O95969 90 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 FAM106AQ4KMX7 169 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 TMEM116Q8NCL8 245 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 CIB3Q96Q77 187 aaPredicted RBP10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 GAR1Q9NY12 217 aaKnown RBP10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 SIGLEC8Q9NYZ4 499 aa10.91□□□□□ -0.66
SRGAP3-208ENST00000490348 C7orf66A4D0T2 115 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 NDUFA4O00483 81 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 NUPL2O15504 423 aaKnown RBP10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 CLN5O75503 358 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 SIX6O95475 246 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 IGKV1-17P01599 117 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 IFNA4P05014 189 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 FOLR2P14207 255 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 NPBWR1P48145 328 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 CD69Q07108 199 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 SPANXN5Q5MJ07 72 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 C2orf50Q96LR7 162 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 PEMTQ9UBM1 199 aa10.9□□□□□ -0.66
SRGAP3-208ENST00000490348 RPS10-NUDT3A0A1W2PQS6 291 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 WI2-2373I1.2A0A1W2PRP0 233 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 GOSR2O14653 212 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 IGLC1P0CG04 106 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 RND2P52198 227 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 SMIM8Q96KF7 97 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 C11orf1Q9H5F2 150 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 SELENOKQ9Y6D0 94 aa10.9□□□□□ -0.67
SRGAP3-208ENST00000490348 COL7A1Q02388 2944 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 K7EPK0 472 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 SLC25A4P12235 298 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 CBLN1P23435 193 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 H2BFSP57053 126 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 GAMTQ14353 236 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 GSG1LQ6UXU4 331 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 NPIPB3Q92617 1050 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 WDR89Q96FK6 387 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 PAIP2BQ9ULR5 123 aaKnown RBP10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 ALG5Q9Y673 324 aa10.89□□□□□ -0.67
SRGAP3-208ENST00000490348 IZUMO1RA6ND01 250 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 PMS2P5A8MQ11 134 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 ZNF207O43670 478 aaKnown RBP10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 CCNKO75909 580 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 GPX4P36969 197 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms