RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 IAPPP10997 89 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 BCL3P20749 454 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 HNF1AP20823 631 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 KITLGP21583 273 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 GDF1P27539 372 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ARR3P36575 388 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 CEACAM3P40198 252 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OPRK1P41145 380 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 MAGEA5P43359 124 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 UQCRFS1P47985 274 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 REG1BP48304 166 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF83P51522 516 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 CLDN18P56856 261 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 SELENOVP59797 346 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 KRTDAPP60985 99 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 PCBD1P61457 104 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 CX3CL1P78423 397 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 TGFBR3Q03167 851 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF90Q03938 601 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 TFF3Q07654 80 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 PSG7Q13046 419 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 BATFQ16520 125 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 IZUMO4Q1ZYL8 232 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 CLEC12BQ2HXU8 276 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 HLA-DRB5Q30154 266 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 CEACAM21Q3KPI0 293 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OCIAD2Q56VL3 154 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 SPANXN5Q5MJ07 72 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 FFAR4Q5NUL3 377 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 SPATA46Q5T0L3 261 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 RAET1LQ5VY80 246 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 PLCXD3Q63HM9 321 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 UNQ5815/PRO19632Q6UWF5 114 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 MMD2Q8IY49 270 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 DEFB125Q8N687 156 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 C11orf44Q8N8P7 122 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF709Q8N972 641 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 SCCPDHQ8NBX0 429 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OR10P1Q8NGE3 313 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OR51H1Q8NH63 302 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OR1L1Q8NH94 360 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OR2AE1Q8NHA4 323 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 DAZAP1Q96EP5 407 aaKnown RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 SMIM12Q96EX1 92 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 DERL1Q9BUN8 251 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 SAMD10Q9BYL1 202 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 DEFB126Q9BYW3 111 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ULBP2Q9BZM5 246 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 PKIBQ9C010 78 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OR2H1Q9GZK4 316 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 PATZ1Q9HBE1 687 aaKnown RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ST20Q9HBF5 79 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 OSTCQ9NRP0 149 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 KCNIP1Q9NZI2 227 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 MTCH1Q9NZJ7 389 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 ABI3Q9P2A4 366 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 LSM4Q9Y4Z0 139 aaKnown RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 CHCHD2Q9Y6H1 151 aaPredicted RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 V9GYV3 84 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 NCOA6Q14686 2063 aaPredicted RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 INTS1Q8N201 2190 aaKnown RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 AHCTF1Q8WYP5 2266 aa2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 GCN1Q92616 2671 aaKnown RBP2.81□□□□□ -1.96
CRNKL1-203ENST00000490258 TRAV24A0A0B4J272 114 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 SMIM27A0A1W2PRY6 76 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 DPRXA6NFQ7 191 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF716A6NP11 495 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 SNURFLB1AK76 121 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 TMEM238C9JI98 176 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 USP17L23D6RBM5 183 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 FNDC10F2Z333 226 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 NPIPA3F8WFD2 350 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 FCN1O00602 326 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 ISLRO14498 428 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 RRHO14718 337 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 TAX1BP3O14907 124 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 RAB29O14966 203 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 TNFSF12O43508 249 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 TRAPPC6AO75865 159 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 NEURL1O76050 574 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 ZFAND5O76080 213 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 CLDN14O95500 239 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 CXorf1O96002 111 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 IGHEP01854 428 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 NBEAP1P0C6P0 100 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF32P17041 273 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 GCHFRP30047 84 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 IER3P46695 156 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 AMTP48728 403 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 SSR4P51571 173 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 MLF1P58340 268 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 ERVK11-1P61568 191 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 RPL19P84098 196 aaKnown RBP2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 PLGLB1Q02325 96 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 RBPJQ06330 500 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 OR1C1Q15619 314 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 RPEL1Q2QD12 228 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 FAM120AOSQ5T036 256 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 STUMQ69YW2 141 aa2.8□□□□□ -1.96
CRNKL1-203ENST00000490258 HIST2H2BCQ6DN03 193 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms