RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 SLC7A5P1Q8MH63 180 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 CIARTQ8N365 385 aaPredicted RBP6.12□□□□□ -1.43
SMC6-209ENST00000489535 LRRC20Q8TCA0 184 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 SSMEM1Q8WWF3 244 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 TAF15Q92804 592 aaKnown RBP eCLIP6.12□□□□□ -1.43
SMC6-209ENST00000489535 CXorf58Q96LI9 332 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 P2RX4Q99571 388 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 RASL11BQ9BPW5 248 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 SLC25A33Q9BSK2 321 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 RSG1Q9BU20 258 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 WDR61Q9GZS3 305 aaKnown RBP6.12□□□□□ -1.43
SMC6-209ENST00000489535 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 MAP1AP78559 2803 aaPredicted RBP6.11□□□□□ -1.43
SMC6-209ENST00000489535 ITPR3Q14573 2671 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 LINC00862A6NCI5 91 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 ZNF705EA8MWA4 302 aaPredicted RBP6.11□□□□□ -1.43
SMC6-209ENST00000489535 ATP6V1G1O75348 118 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 HLA-DRB1P01911 266 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 FAM157CP0CG43 387 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 BPIFB3P59826 476 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 AKR1C1Q04828 323 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 LY6EQ16553 131 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 DEFB112Q30KQ8 113 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 Q6ZRG5 221 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 C19orf35Q6ZS72 473 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 HSD17B13Q7Z5P4 300 aaPredicted RBP6.11□□□□□ -1.43
SMC6-209ENST00000489535 TMEM219Q86XT9 240 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 ZNF114Q8NC26 417 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 NANPQ8TBE9 248 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 PIFOQ8TCI5 191 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 ARPC1AQ92747 370 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 RBM14Q96PK6 669 aaKnown RBP6.11□□□□□ -1.43
SMC6-209ENST00000489535 PSMG3Q9BT73 122 aaPredicted RBP6.11□□□□□ -1.43
SMC6-209ENST00000489535 FAM103A1Q9BTL3 118 aaKnown RBP6.11□□□□□ -1.43
SMC6-209ENST00000489535 GGACTQ9BVM4 153 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 KRTAP1-5Q9BYS1 174 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 WDR83OSQ9Y284 106 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 MOB4Q9Y3A3 225 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 FBXO7Q9Y3I1 522 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 TIMM9Q9Y5J7 89 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 CSPG4Q6UVK1 2322 aa6.11□□□□□ -1.43
SMC6-209ENST00000489535 TEX15Q9BXT5 2789 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 IGHV7-81A0A0B4J1V7 117 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 A6NDX4 124 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 SH2D7A6NKC9 451 aaPredicted RBP6.1□□□□□ -1.43
SMC6-209ENST00000489535 FNDC10F2Z333 226 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 C17orf112F2Z3M2 114 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 PRH1P02810 166 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 OPRK1P41145 380 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 CAMLGP49069 296 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 CX3CL1P78423 397 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 BLOC1S1P78537 153 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 NDPQ00604 133 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 CD69Q07108 199 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 AKR1C8PQ5T2L2 129 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 BTNL8Q6UX41 500 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 ZNF562Q6V9R5 426 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 SLC16A13Q7RTY0 426 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 COMMD7Q86VX2 200 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 C5orf56Q8N8D9 126 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 RNASEH2CQ8TDP1 164 aaKnown RBP6.1□□□□□ -1.43
SMC6-209ENST00000489535 C22orf15Q8WYQ4 148 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 SAT2Q96F10 170 aaPredicted RBP6.1□□□□□ -1.43
SMC6-209ENST00000489535 SLC35E1Q96K37 410 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 C16orf92Q96LL3 132 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 HSPB9Q9BQS6 159 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 SRSF8Q9BRL6 282 aaKnown RBP6.1□□□□□ -1.43
SMC6-209ENST00000489535 NPCDR1Q9BY65 106 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 NPVFQ9HCQ7 196 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 PARP11Q9NR21 331 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 PFDN2Q9UHV9 154 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 PITPNC1Q9UKF7 332 aa6.1□□□□□ -1.43
SMC6-209ENST00000489535 F11RQ9Y624 299 aaKnown RBP6.1□□□□□ -1.43
SMC6-209ENST00000489535 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 TEX46H3BTG2 121 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 TRIM77I1YAP6 450 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 CORTO00230 105 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 MPDU1O75352 247 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 CTRB1P17538 263 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 MDKP21741 143 aaPredicted RBP6.09□□□□□ -1.43
SMC6-209ENST00000489535 GPX4P36969 197 aaPredicted RBP6.09□□□□□ -1.43
SMC6-209ENST00000489535 RAB5CP51148 216 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 MFAP2P55001 183 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 ELLP55199 621 aaPredicted RBP6.09□□□□□ -1.43
SMC6-209ENST00000489535 ZNF616Q08AN1 781 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 AANATQ16613 207 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 C9orf152Q5JTZ5 239 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 PXDC1Q5TGL8 231 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 CTRB2Q6GPI1 263 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 C9orf139Q6ZV77 190 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 IL17RELQ6ZVW7 336 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 ZNF709Q8N972 641 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 OR1P1Q8NH06 330 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 FAM213BQ8TBF2 198 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 MGST2Q99735 147 aa6.09□□□□□ -1.43
SMC6-209ENST00000489535 FNDC4Q9H6D8 234 aaPredicted RBP6.09□□□□□ -1.43
SMC6-209ENST00000489535 ITPR2Q14571 2701 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 IGHV3-21A0A0B4J1V1 117 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 AGPAT2O15120 278 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms