RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 Q56UQ5 140 aa11.9□□□□□ -0.5
SMIM11A-206ENST00000489469 C1QL4Q86Z23 238 aa11.9□□□□□ -0.5
SMIM11A-206ENST00000489469 DCUN1D4Q92564 292 aa11.9□□□□□ -0.5
SMIM11A-206ENST00000489469 DLX4Q92988 240 aaPredicted RBP11.9□□□□□ -0.5
SMIM11A-206ENST00000489469 RAB40CQ96S21 281 aa11.9□□□□□ -0.5
SMIM11A-206ENST00000489469 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 TGOLN2O43493 480 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 IFNA4P05014 189 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 TAS2R30P59541 319 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 CYCSP99999 105 aaKnown RBP11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 OXA1LQ15070 435 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 GPHB5Q86YW7 130 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 SMIM8Q96KF7 97 aa11.89□□□□□ -0.51
SMIM11A-206ENST00000489469 OR2T8A6NH00 312 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 GOSR2O14653 212 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 SSSCA1O60232 199 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 GNG7O60262 68 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 INSL3P51460 131 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 C9orf66Q5T8R8 295 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 TMEM170AQ8WVE7 144 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 ELOVL1Q9BW60 279 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 STRAPQ9Y3F4 350 aaKnown RBP11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
SMIM11A-206ENST00000489469 NOTCH1P46531 2555 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 SORL1Q92673 2214 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 NBEAL1Q6ZS30 2694 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 TRAV30A0A087WSZ9 112 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 C15orf62A8K5M9 175 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 F8W735 103 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 LGALS9O00182 355 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 TSC22D2O75157 780 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 IGLL1P15814 213 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 GPX4P36969 197 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 CD69Q07108 199 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 CACNG8Q8WXS5 425 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 NMES1Q9C002 83 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
SMIM11A-206ENST00000489469 A6NJY4 79 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 SEC14L6B5MCN3 397 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 L7N2F9 121 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 CLN5O75503 358 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 SCAF4O95104 1147 aaKnown RBP11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 OR2C1O95371 312 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 VAMP2P63027 116 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 IL15RAQ13261 267 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 SAMD5Q5TGI4 173 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 C11orf87Q6NUJ2 197 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 REC114Q7Z4M0 266 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 TMEM116Q8NCL8 245 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 PAIP2BQ9ULR5 123 aaKnown RBP11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
SMIM11A-206ENST00000489469 K7EPK0 472 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 NDUFA4O00483 81 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 WIPF1O43516 503 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 CTSGP08311 255 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 SLC16A13Q7RTY0 426 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 SLC35E1Q96K37 410 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 OR4C12Q96R67 309 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 ZNF436Q9C0F3 470 aaPredicted RBP11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 MGAT4CQ9UBM8 478 aa11.85□□□□□ -0.51
SMIM11A-206ENST00000489469 A8MWP6 167 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 H3BP45 60 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 SAP30O75446 220 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 SIX6O95475 246 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 TMEM50AO95807 157 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 IGHV3-48P01763 117 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 RLN2P04090 185 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 ELLP55199 621 aaPredicted RBP11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 S100A10P60903 97 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 RAB32Q13637 225 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 PRSS54Q6PEW0 395 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 CHRDL1Q9BU40 450 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 MED28Q9H204 178 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 ZC4H2Q9NQZ6 224 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 SIGLEC8Q9NYZ4 499 aa11.84□□□□□ -0.51
SMIM11A-206ENST00000489469 PET100P0DJ07 73 aa11.83□□□□□ -0.52
SMIM11A-206ENST00000489469 ADMP35318 185 aa11.83□□□□□ -0.52
SMIM11A-206ENST00000489469 RND2P52198 227 aa11.83□□□□□ -0.52
SMIM11A-206ENST00000489469 PAX9P55771 341 aa11.83□□□□□ -0.52
SMIM11A-206ENST00000489469 MLANAQ16655 118 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms